RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 OR2A1Q8NGT9 310 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 OR4F5Q8NH21 305 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 CCDC74AQ96AQ1 378 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 LINC00615Q96LM1 132 aaPredicted RBP8.02□□□□□ -1.13
PTPRM-202ENST00000400053 OR4F4Q96R69 305 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 MARVELD1Q9BSK0 173 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 LYRM4Q9HD34 91 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 NRXN2Q9P2S2 1712 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 MEIKINA0A087WXM9 373 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 RFPL4AA6NLU0 287 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 RFPL4AL1F8VTS6 287 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 AQP7O14520 342 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 TERTO14746 1132 aaKnown RBP8.02□□□□□ -1.13
PTPRM-202ENST00000400053 PPM1DO15297 605 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 ZNF207O43670 478 aaKnown RBP8.02□□□□□ -1.13
PTPRM-202ENST00000400053 LRP3O75074 770 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 ALOX12BO75342 701 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 AKR7A3O95154 331 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 PCBP4P57723 403 aaKnown RBP8.02□□□□□ -1.13
PTPRM-202ENST00000400053 ELAVL1Q15717 326 aaKnown RBP8.02□□□□□ -1.13
PTPRM-202ENST00000400053 CLPPQ16740 277 aaPredicted RBP8.02□□□□□ -1.13
PTPRM-202ENST00000400053 LHFPL2Q6ZUX7 228 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 LYG2Q86SG7 212 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 SIGLEC11Q96RL6 698 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 TINAGL1Q9GZM7 467 aaPredicted RBP8.02□□□□□ -1.13
PTPRM-202ENST00000400053 ZNF346Q9UL40 294 aaKnown RBP8.02□□□□□ -1.13
PTPRM-202ENST00000400053 TIMM9Q9Y5J7 89 aa8.02□□□□□ -1.13
PTPRM-202ENST00000400053 FGF17O60258 216 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 LIMS3P0CW19 117 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 LIMS4P0CW20 117 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 GCSHP23434 173 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 TPPP2P59282 170 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 SLC16A13Q7RTY0 426 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 COMMD1Q8N668 190 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 ZNF485Q8NCK3 441 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 GPX8Q8TED1 209 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 EID2BQ96D98 161 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 MAGT1Q9H0U3 335 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 UCK1Q9HA47 277 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 MBNL1Q9NR56 388 aaKnown RBP8.01□□□□□ -1.13
PTPRM-202ENST00000400053 CTSFQ9UBX1 484 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 HYAL3O43820 417 aaPredicted RBP8.01□□□□□ -1.13
PTPRM-202ENST00000400053 CTSLP07711 333 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 GUSBP08236 651 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 CLN3Q13286 438 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 C12orf73Q69YU5 71 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 OR2W3Q7Z3T1 314 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 TP53I13Q8NBR0 393 aaPredicted RBP8.01□□□□□ -1.13
PTPRM-202ENST00000400053 OR10D4PQ8NGN7 298 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 OR1J1Q8NGS3 322 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 OR2G2Q8NGZ5 317 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 CMBLQ96DG6 245 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 MRPS24Q96EL2 167 aaKnown RBP8.01□□□□□ -1.13
PTPRM-202ENST00000400053 CXorf58Q96LI9 332 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 SMIM7Q9BQ49 75 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 CLCF1Q9UBD9 225 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 ICE1Q9Y2F5 2266 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 A0A1B0GX78 115 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 A0A1W2PPQ1 181 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 TCRBV16S1A1N1A0A5B0 115 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 FIGNL2A6NMB9 653 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 RAB27BO00194 218 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 CCR2P41597 374 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 RAB7AP51149 207 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 PRTGQ2VWP7 1150 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 NHLRC1Q6VVB1 395 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 TRAF4Q9BUZ4 470 aaPredicted RBP8.01□□□□□ -1.13
PTPRM-202ENST00000400053 KIR3DX1Q9H7L2 352 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 LOC102723971A0A1B0GUV8 181 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 UPK1AO00322 258 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 TNFRSF10CO14798 259 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 BSGP35613 385 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 LBX1P52954 281 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 PPP1CAP62136 330 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 SSBP1Q04837 148 aaKnown RBP8.01□□□□□ -1.13
PTPRM-202ENST00000400053 RPL18Q07020 188 aaKnown RBP8.01□□□□□ -1.13
PTPRM-202ENST00000400053 DUSP8Q13202 625 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 SPANXN5Q5MJ07 72 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 CNRIP1Q96F85 164 aaPredicted RBP8.01□□□□□ -1.13
PTPRM-202ENST00000400053 C2orf50Q96LR7 162 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 LINC00052Q96N35 136 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 ABHD1Q96SE0 405 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 PCED1AQ9H1Q7 454 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 AAMDCQ9H7C9 122 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 HES4Q9HCC6 221 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 LANCL2Q9NS86 450 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 HS3ST3A1Q9Y663 406 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 POLR2AP24928 1970 aaKnown RBP8.01□□□□□ -1.13
PTPRM-202ENST00000400053 FER1L6Q2WGJ9 1857 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 AREGP15514 252 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 MPGP29372 298 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 RPS16P62249 146 aaKnown RBP8.01□□□□□ -1.13
PTPRM-202ENST00000400053 IFITM3Q01628 133 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 EIF4EBP2Q13542 120 aaPredicted RBP8.01□□□□□ -1.13
PTPRM-202ENST00000400053 TRIM61Q5EBN2 209 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 C11orf87Q6NUJ2 197 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 LINC00696Q6ZRV3 163 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 ARIH2OSQ8N7S6 290 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 BHLHE23Q8NDY6 225 aa8.01□□□□□ -1.13
PTPRM-202ENST00000400053 AKR7LQ8NHP1 331 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms