RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 KCNJ15Q99712 375 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 GON7Q9BXV9 100 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 PTTG3PQ9NZH4 202 aa10.13□□□□□ -0.79
SKA3-203ENST00000400018 POLQO75417 2590 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 TMEM8BA6NDV4 472 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 AKR7A2O43488 359 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 ZG16O60844 167 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 RNF224P0DH78 156 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 ATF1P18846 271 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 SRMP19623 302 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 PSMA6P60900 246 aaKnown RBP10.12□□□□□ -0.79
SKA3-203ENST00000400018 GMFBP60983 142 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 UBE2NP61088 152 aaKnown RBP10.12□□□□□ -0.79
SKA3-203ENST00000400018 CD83Q01151 205 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 P2RY14Q15391 338 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 PARP16Q8N5Y8 322 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 GALNT11Q8NCW6 608 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 LINC01560Q8TB33 94 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 PIGTQ969N2 578 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 USB1Q9BQ65 265 aaKnown RBP10.12□□□□□ -0.79
SKA3-203ENST00000400018 COMMD4Q9H0A8 199 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 ZC4H2Q9NQZ6 224 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 DHDHQ9UQ10 334 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 ZNF835Q9Y2P0 537 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 OR6C6A6NF89 314 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 RPL36A-HNRNPH2H7BZ11 118 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 IL7P13232 177 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 CEACAM8P31997 349 aaPredicted RBP10.12□□□□□ -0.79
SKA3-203ENST00000400018 ADORA2A-AS1P86434 159 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 SLC36A2Q495M3 483 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 HSD17B12Q53GQ0 312 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 CDH24Q86UP0 819 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 LINC00518Q8N0U6 118 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 OR4M2Q8NGB6 313 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 C14orf119Q9NWQ9 140 aa10.12□□□□□ -0.79
SKA3-203ENST00000400018 CELSR1Q9NYQ6 3014 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 A0A0G2JK05 382 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 A0A1W2PP11 408 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 A8MXE2 369 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 I3L521 148 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 M0R1B8 84 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 GPRIN2O60269 458 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 HPGDSO60760 199 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 CTSSP25774 331 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 HIST1H3AP68431 136 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 RAB35Q15286 201 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 Q499Y3 187 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 HIST2H3PS2Q5TEC6 136 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 HIST2H3AQ71DI3 136 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 BHLHA15Q7RTS1 189 aaPredicted RBP10.11□□□□□ -0.79
SKA3-203ENST00000400018 NRARPQ7Z6K4 114 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 WFDC8Q8IUA0 241 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 SLC30A7Q8NEW0 376 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 FAM46BQ96A09 425 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 ZNF75AQ96N20 296 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 ACTR6Q9GZN1 396 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 DIABLOQ9NR28 239 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 GPR173Q9NS66 373 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 NUFIP1Q9UHK0 495 aaKnown RBP10.11□□□□□ -0.79
SKA3-203ENST00000400018 TUBD1Q9UJT1 453 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 MEMO1Q9Y316 297 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 USF3Q68DE3 2245 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 TOR1AO14656 332 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 NDUFA2O43678 99 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 CALCRP30988 508 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 MMP16P51512 607 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 SCRN3Q0VDG4 424 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 MSMPQ1L6U9 139 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 OR52N4Q8NGI2 321 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 GPR148Q8TDV2 347 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 ST8SIA2Q92186 375 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 REEP6Q96HR9 211 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 SLC17A5Q9NRA2 495 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 RYDENQ9NUL5 291 aaKnown RBP10.11□□□□□ -0.79
SKA3-203ENST00000400018 PIGLQ9Y2B2 252 aa10.11□□□□□ -0.79
SKA3-203ENST00000400018 PHYHO14832 338 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 CECR9P0C854 216 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 TIMP3P35625 211 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 TAS2R43P59537 309 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 OR2T2Q6IF00 324 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 OR2A2Q6IF42 318 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 TMEM65Q6PI78 240 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 DEDD2Q8WXF8 326 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 GTF3AQ92664 365 aaKnown RBP10.1□□□□□ -0.79
SKA3-203ENST00000400018 NEUROG1Q92886 237 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 FBXW5Q969U6 566 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 RADILQ96JH8 1075 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 POM121L2Q96KW2 1035 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 OR2J1Q9GZK6 312 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 NIPAL2Q9H841 368 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 ISYNA1Q9NPH2 558 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 EIF3KQ9UBQ5 218 aaKnown RBP10.1□□□□□ -0.79
SKA3-203ENST00000400018 GSTK1Q9Y2Q3 226 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 IGKV1-9A0A0C4DH69 117 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 TMEM212A6NML5 194 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 NR2C1P13056 603 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 TALDO1P37837 337 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 DEFA1P59665 94 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 DEFA3P59666 94 aa10.1□□□□□ -0.79
SKA3-203ENST00000400018 BDH1Q02338 343 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms