RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 CHCHD3Q9NX63 227 aaKnown RBP10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MRPL15Q9P015 296 aaKnown RBP10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 FBXO9Q9UK97 447 aaPredicted RBP10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 BLOC1S6Q9UL45 172 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 ERGIC3Q9Y282 383 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 LRCH1Q9Y2L9 728 aa10.53□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MYO9AB2RTY4 2548 aa10.52□□□□□ -0.72
HLA-DQB1-203ENST00000399082 TRBV2A0A0J9YWF9 115 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 A6NIN4 97 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TMEM212A6NML5 194 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 F5H5P2 479 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 LYNX1G3V0Z9 82 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 F12P00748 615 aaPredicted RBP10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CST4P01036 141 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 LYNX1P0DP58 116 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 BMP4P12644 408 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ATP6V1B1P15313 513 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PCMT1P22061 227 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ACHEP22303 614 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 EEF1B2P24534 225 aaKnown RBP10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 EFNA4P52798 201 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 RPS11P62280 158 aaKnown RBP eCLIP10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ACSM1Q08AH1 577 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 MAB21L1Q13394 359 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 SPHARQ15513 63 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TESK1Q15569 626 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TSTQ16762 297 aaKnown RBP10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 FAM209AQ5JX71 171 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TMEM42Q69YG0 159 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 WDR86Q86TI4 376 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 SPARTQ8N0X7 666 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CSNK2A3Q8NEV1 391 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 SEMA6DQ8NFY4 1073 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 OR13C5Q8NGS8 318 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 OR13G1Q8NGZ3 307 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 HAVCR2Q8TDQ0 301 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ITLN1Q8WWA0 313 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 YIPF5Q969M3 257 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ADAT3Q96EY9 351 aaPredicted RBP10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TRMT61AQ96FX7 289 aaKnown RBP10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 MEGF10Q96KG7 1140 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ADAT1Q9BUB4 502 aaKnown RBP10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ACOT13Q9NPJ3 140 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TRIM36Q9NQ86 728 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TMEM100Q9NV29 134 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZDHHC8Q9ULC8 765 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 EDARQ9UNE0 448 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PIGLQ9Y2B2 252 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CACNG2Q9Y698 323 aa10.52□□□□□ -0.73
HLA-DQB1-203ENST00000399082 IGHV3-64DA0A0J9YX35 117 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZNF816-ZNF321PA0A0X1KG74 233 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 LOC100289279A0A1B0GTE1 492 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PNMA8CA0A1B0GUJ8 204 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 A0A1B0GVI7 797 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 DHRS7CA6NNS2 312 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 SYT7O43581 403 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 MRPS14O60783 128 aaKnown RBP10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 RP2O75695 350 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CD200P41217 278 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 MAP2K3P46734 347 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 CHN2P52757 468 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 BDH1Q02338 343 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 EMX1Q04741 257 aaPredicted RBP10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 SLC3A1Q07837 685 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PRDX4Q13162 271 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 OR8G1Q15617 311 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PCGF3Q3KNV8 242 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZMAT1Q5H9K5 638 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 DMRTC1Q5HYR2 192 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TMEM244Q5VVB8 128 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ASPHD2Q6ICH7 369 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZNF773Q6PK81 442 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZNF525Q8N782 197 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZNF676Q8N7Q3 588 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 OR5AK2Q8NH90 309 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 NEU4Q8WWR8 484 aaPredicted RBP10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ITPKCQ96DU7 683 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 OPALINQ96PE5 141 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 OR2V2Q96R30 315 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 DIRC2Q96SL1 478 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PAPOLGQ9BWT3 736 aaKnown RBP10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 RAB1BQ9H0U4 201 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 DCAF16Q9NXF7 216 aa10.51□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TRBV5-5A0A0J9YX44 114 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ANKRD30BLA7E2S9 258 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZNF850A8MQ14 1090 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PLPP2O43688 288 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 SSX4O60224 188 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 GMDSO60547 372 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PTBP3O95758 552 aaKnown RBP10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 COL8A2P25067 703 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 THBS2P35442 1172 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 PMELP40967 661 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ART1P52961 327 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TAS2R43P59537 309 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 TNFAIP6P98066 277 aaPredicted RBP10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 RIPPLY1Q0D2K3 151 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 MED22Q15528 200 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 Q5PR19 223 aa10.5□□□□□ -0.73
HLA-DQB1-203ENST00000399082 ZBTB37Q5TC79 503 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms