RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 NAAAQ02083 359 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 ROM1Q03395 351 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 OR4D1Q15615 310 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 SMAD2Q15796 467 aaKnown RBP4.54□□□□□ -1.68
TTC3-204ENST00000399017 XKR7Q5GH72 579 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 LRFN3Q9BTN0 628 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 C1QTNF6Q9BXI9 259 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 PRDM14Q9GZV8 571 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 NUBP2Q9Y5Y2 271 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 PPM1DO15297 605 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 FAM155BO75949 473 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 SEMG1P04279 462 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 HAAOP46952 286 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 RFX2P48378 723 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 ERVK11-1P61568 191 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 LHX8Q68G74 356 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 BMPERQ8N8U9 685 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 OR4C13Q8NGP0 309 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 SPACA9Q96E40 222 aaPredicted RBP4.54□□□□□ -1.68
TTC3-204ENST00000399017 ZNF727A8MUV8 499 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 MBTPS2O43462 519 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 JTBO76095 146 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 GPR6P46095 362 aaPredicted RBP4.54□□□□□ -1.68
TTC3-204ENST00000399017 CDX1P47902 265 aaPredicted RBP4.54□□□□□ -1.68
TTC3-204ENST00000399017 TAS2R60P59551 318 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 OR2I1PQ8NGU4 316 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 HRH3Q9Y5N1 445 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 CIDEAO60543 219 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 KLF7O75840 302 aaPredicted RBP4.54□□□□□ -1.68
TTC3-204ENST00000399017 APEHP13798 732 aaKnown RBP4.54□□□□□ -1.68
TTC3-204ENST00000399017 SSX1Q16384 188 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 ZXDCQ2QGD7 858 aaPredicted RBP4.54□□□□□ -1.68
TTC3-204ENST00000399017 TRMT12Q53H54 448 aaKnown RBP4.54□□□□□ -1.68
TTC3-204ENST00000399017 WDR74Q6RFH5 385 aaPredicted RBP4.54□□□□□ -1.68
TTC3-204ENST00000399017 METAP1DQ6UB28 335 aaPredicted RBP4.54□□□□□ -1.68
TTC3-204ENST00000399017 PET117Q6UWS5 81 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 RFPL4BQ6ZWI9 263 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 LGI3Q8N145 548 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 MGLLQ99685 303 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 SPOCK3Q9BQ16 436 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 BCL7BQ9BQE9 202 aa4.54□□□□□ -1.68
TTC3-204ENST00000399017 SONP18583 2426 aaKnown RBP4.54□□□□□ -1.68
TTC3-204ENST00000399017 BMP2P12643 396 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 COX5AP20674 150 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 HOXD9P28356 352 aaPredicted RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 ZXDBP98169 803 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 C1orf140Q5VVS0 124 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 TMEM268Q5VZI3 342 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 DHRS7BQ6IAN0 325 aaPredicted RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 GTF2H5Q6ZYL4 71 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 KCNRGQ8N5I3 272 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 KLHDC9Q8NEP7 349 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 OR4C3Q8NH37 302 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 PCGF1Q9BSM1 259 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 ZNF552Q9H707 407 aaPredicted RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 PEMTQ9UBM1 199 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 STRAPQ9Y3F4 350 aaKnown RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 ABCA2Q9BZC7 2435 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 PGPA6NDG6 321 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 CNMDO75829 334 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 SRMP19623 302 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 CCR7P32248 378 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 CAPZBP47756 277 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 MNX1P50219 401 aaPredicted RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 GFRA1P56159 465 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 DLX1P56177 255 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 TM4SF20Q53R12 229 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 ZNF789Q5FWF6 425 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 ZNF648Q5T619 568 aaPredicted RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 OSTM1Q86WC4 334 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 KLHDC1Q8N7A1 406 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 OR10J6PQ8NGY7 276 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 GMPPAQ96IJ6 420 aaPredicted RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 HSD17B10Q99714 261 aaKnown RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 ADAT1Q9BUB4 502 aaKnown RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 BET1LQ9NYM9 111 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 PRR33A8MZF0 331 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 SMAD9O15198 467 aaKnown RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 SLC25A20O43772 301 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 PRKACGP22612 351 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 TSPAN7P41732 249 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 OTUD1Q5VV17 481 aaPredicted RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 DUSP18Q8NEJ0 188 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 UBQLN3Q9H347 655 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 SNX11Q9Y5W9 270 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 C9JVG2 144 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 PPP5D1E7EU14 171 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 SOX15O60248 233 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 CFDP00746 253 aaPredicted RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 GP2P55259 537 aaKnown RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 ZBTB34Q8NCN2 500 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 ZNF775Q96BV0 537 aaPredicted RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 ZMYND19Q96E35 227 aaPredicted RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 ZNF230Q9UIE0 474 aaPredicted RBP4.53□□□□□ -1.68
TTC3-204ENST00000399017 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 TRIM77I1YAP6 450 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 TNFSF12O43508 249 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 PRR35P0CG20 571 aa4.53□□□□□ -1.68
TTC3-204ENST00000399017 ELK1P19419 428 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms