RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SLC46A1Q96NT5 459 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 PRRT1Q99946 306 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 TXNIPQ9H3M7 391 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 SLCO1B1Q9Y6L6 691 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 SEC14L6B5MCN3 397 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 PRAMEF26H0Y7S4 382 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 P2RY10O00398 339 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 ARG1P05089 322 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 HLA-DOBP13765 273 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 SLC26A5P58743 744 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 RAB1AP62820 205 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 ZP2Q05996 745 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 GAMTQ14353 236 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 MEF2DQ14814 521 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 SURF2Q15527 256 aaPredicted RBP14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 UNQ6494/PRO21346Q6UXR6 183 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 TGIF2LXQ8IUE1 241 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 TCTN2Q96GX1 697 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 SLC2A8Q9NY64 477 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 VSX1Q9NZR4 365 aaPredicted RBP14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 GDF2Q9UK05 429 aaPredicted RBP14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 R4GMQ9 66 aa14.2□□□□□ -0.14
CHMP1A-201ENST00000397901 TMED7-TICAM2A0A0A6YYA0 188 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 FRG2CA6NGY1 282 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 IGLV3-19P01714 112 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 HKR1P10072 659 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 AKR1C4P17516 323 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 SERPINF1P36955 418 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 NUBP1P53384 320 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 FMODQ06828 376 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 FOXO1Q12778 655 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 CLEC9AQ6UXN8 241 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 HEPN1Q6WQI6 88 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 ADAD2Q8NCV1 583 aaKnown RBP14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 CCDC54Q8NEL0 328 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 MAFIPQ8WZ33 124 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 SOX7Q9BT81 388 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 TBL1XR1Q9BZK7 514 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 OR52A1Q9UKL2 312 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 CBY1Q9Y3M2 126 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 SPTY2D1-AS1A0A0U1RR47 76 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 H7C1Q1 480 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 F10P00742 488 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 SERPINA5P05154 406 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 IL11P20809 199 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 CCR5P51681 352 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 GFERP55789 205 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 GLO1Q04760 184 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 ACTBL2Q562R1 376 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 ZNF574Q6ZN55 896 aaPredicted RBP14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 NUP54Q7Z3B4 507 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 DCXRQ7Z4W1 244 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 DPPA2Q7Z7J5 298 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 RTN4RL2Q86UN3 420 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 ADIPOR1Q96A54 375 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 AQP10Q96PS8 301 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 C20orf24Q9BUV8 137 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 LANCL2Q9NS86 450 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 FAM86C1Q9NVL1 165 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 DOK5Q9P104 306 aa14.19□□□□□ -0.14
CHMP1A-201ENST00000397901 A0A1W2PPE2 198 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 H0YIZ8 118 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 SOX1O00570 391 aaPredicted RBP14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 STK17BO94768 372 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 DUS4LO95620 317 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 LSM6P62312 80 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 C1orf140Q5VVS0 124 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 PRSS58Q8IYP2 241 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 AQP3Q92482 292 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 TGM7Q96PF1 710 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 ZNF576Q9H609 170 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 CNTD2Q9H8S5 307 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 TAF9BQ9HBM6 251 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 SPACA1Q9HBV2 294 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 G6PC2Q9NQR9 355 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 GPR27Q9NS67 375 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 CENPMQ9NSP4 180 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 PRUNE2Q8WUY3 3088 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 TMEM269A0A1B0GVZ9 245 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 MEGF11A6BM72 1044 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 MSGN1A6NI15 193 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 TMEM150CB9EJG8 249 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 RAB27BO00194 218 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 SRSF10O75494 262 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 LYL1P12980 280 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 PAX1P15863 534 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 PGCP20142 388 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 HRH1P35367 487 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 ZNF260Q3ZCT1 412 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 KIAA0895LQ68EN5 471 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 TTLL10Q6ZVT0 673 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 PPP1R3BQ86XI6 285 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 FGGYQ96C11 551 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 MRPL37Q9BZE1 423 aaKnown RBP14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 CYP8B1Q9UNU6 501 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 MTCH2Q9Y6C9 303 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 RP1P56715 2156 aa14.18□□□□□ -0.14
CHMP1A-201ENST00000397901 IGHV5-51A0A0C4DH38 117 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 PLPP3O14495 311 aa14.17□□□□□ -0.14
CHMP1A-201ENST00000397901 MT-ATP6P00846 226 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms