RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 SCPEP1Q9HB40 452 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 CYSLTR2Q9NS75 346 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 FKBP14Q9NWM8 211 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 MGAT4AQ9UM21 535 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 NUBP2Q9Y5Y2 271 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 IGHV3-64DA0A0J9YX35 117 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 OR5B21A6NL26 309 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 TERTO14746 1132 aaKnown RBP7.28□□□□□ -1.24
PTPRD-204ENST00000397606 ATXN7O15265 892 aaPredicted RBP7.28□□□□□ -1.24
PTPRD-204ENST00000397606 SPINT2O43291 252 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 ZNF354AO60765 605 aaPredicted RBP7.28□□□□□ -1.24
PTPRD-204ENST00000397606 PET100P0DJ07 73 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 IL7P13232 177 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 CPN1P15169 458 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 TBR1Q16650 682 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 TEX30Q5JUR7 227 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 MDP1Q86V88 176 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 FAM57AQ8TBR7 257 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 NICN1Q9BSH3 213 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 GSKIPQ9P0R6 139 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 H7C417 338 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 MSTNO14793 375 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 PRAF2O60831 178 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 ADAM11O75078 769 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 SCGB1D2O95969 90 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 GABRB1P18505 474 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 GPM6AP51674 278 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 SUCLG1P53597 346 aaKnown RBP7.28□□□□□ -1.24
PTPRD-204ENST00000397606 OR10A3P58181 314 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 EIF5AP63241 154 aaKnown RBP7.28□□□□□ -1.24
PTPRD-204ENST00000397606 PRDX4Q13162 271 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 SSX1Q16384 188 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 ARSJQ5FYB0 599 aaPredicted RBP7.28□□□□□ -1.24
PTPRD-204ENST00000397606 H1FXQ92522 213 aaKnown RBP7.28□□□□□ -1.24
PTPRD-204ENST00000397606 TRIM63Q969Q1 353 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 LINC00470Q9BZP3 86 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 SESN1Q9Y6P5 492 aa7.28□□□□□ -1.24
PTPRD-204ENST00000397606 A0A0A6YYH2 397 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 A0A0X1KG70 313 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 A6NJ64 397 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 SERPINE2P07093 398 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 CA6P23280 308 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 AKR1C2P52895 323 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 CATSPERDQ86XM0 798 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 DTX1Q86Y01 620 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 OSR2Q8N2R0 312 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 TMEM185AQ8NFB2 350 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 ORAI1Q96D31 301 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 RTN4RQ9BZR6 473 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 ZMAT3Q9HA38 289 aaKnown RBP7.27□□□□□ -1.24
PTPRD-204ENST00000397606 NUDT15Q9NV35 164 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 CYB5R1Q9UHQ9 305 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 PRSS50Q9UI38 385 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 CLDN16Q9Y5I7 305 aa7.27□□□□□ -1.24
PTPRD-204ENST00000397606 TMEM8BA6NDV4 472 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 LRRC3CA6NJW4 275 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 OR4C45A6NMZ5 311 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 CD300LBA8K4G0 201 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 DCTN6O00399 190 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 BET1O15155 118 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 SEMA7AO75326 666 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 RGS11O94810 467 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 MGMTP16455 207 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 NDUFB7P17568 137 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 CRYBB2P43320 205 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 S100A10P60903 97 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 EDDM3AQ14507 147 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 KISS1Q15726 138 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 CTF1Q16619 201 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 NLRC3Q7RTR2 1065 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 CXorf67Q86X51 503 aaPredicted RBP7.27□□□□□ -1.25
PTPRD-204ENST00000397606 ZNF610Q8N9Z0 462 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 DEFB108BQ8NET1 73 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 ELMOD3Q96FG2 381 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 FRRS1LQ9P0K9 344 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 IRF3Q14653 427 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 FAM122BQ7Z309 247 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 ST3GAL6Q9Y274 331 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 HS3ST1O14792 307 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 ACTL6BO94805 426 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 PPP3CBP16298 524 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 ELK1P19419 428 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 AGTR1P30556 359 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 GSK3AP49840 483 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 PSG4Q00888 419 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 TAF9Q16594 264 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 C10orf128Q5T292 105 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 METTL11BQ5VVY1 283 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 LPCAT3Q6P1A2 487 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 TFAP2EQ6VUC0 442 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 FOXRED2Q8IWF2 684 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 OR1K1Q8NGR3 316 aa7.27□□□□□ -1.25
PTPRD-204ENST00000397606 RIMS4Q9H426 269 aaPredicted RBP7.27□□□□□ -1.25
PTPRD-204ENST00000397606 H3BMH7 237 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 GABARAPH6UMI1 98 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 NPIPB7O75200 414 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 SFTPBP07988 381 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 LHX2P50458 406 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 ROM1Q03395 351 aa7.26□□□□□ -1.25
PTPRD-204ENST00000397606 ALKBH6Q3KRA9 238 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms