RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 DYNC1I2Q13409 638 aaKnown RBP17.57■□□□□ 0.4
VCPKMT-202ENST00000395860 CDSNQ15517 529 aa17.57■□□□□ 0.4
VCPKMT-202ENST00000395860 DMRTC1Q5HYR2 192 aa17.57■□□□□ 0.4
VCPKMT-202ENST00000395860 FBXW12Q6X9E4 464 aa17.57■□□□□ 0.4
VCPKMT-202ENST00000395860 LAX1Q8IWV1 398 aa17.57■□□□□ 0.4
VCPKMT-202ENST00000395860 CSNK2A3Q8NEV1 391 aa17.57■□□□□ 0.4
VCPKMT-202ENST00000395860 PIGCQ92535 297 aa17.57■□□□□ 0.4
VCPKMT-202ENST00000395860 WFIKKN1Q96NZ8 548 aa17.57■□□□□ 0.4
VCPKMT-202ENST00000395860 NKX3-1Q99801 234 aaPredicted RBP17.57■□□□□ 0.4
VCPKMT-202ENST00000395860 LIN7BQ9HAP6 207 aa17.57■□□□□ 0.4
VCPKMT-202ENST00000395860 STEAP1Q9UHE8 339 aa17.57■□□□□ 0.4
VCPKMT-202ENST00000395860 SLC17A2O00624 439 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 GMDSO60547 372 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 THBDP07204 575 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 SNRPBP14678 240 aaKnown RBP17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 TUBG1P23258 451 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 CNN3Q15417 329 aaKnown RBP17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 TMEM42Q69YG0 159 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 C1orf174Q8IYL3 243 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 FTMTQ8N4E7 242 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 NPRL2Q8WTW4 380 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 S100ZQ8WXG8 99 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 CMBLQ96DG6 245 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 MRI1Q9BV20 369 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 TUBG2Q9NRH3 451 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 RHBDD3Q9Y3P4 386 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 SPEF1Q9Y4P9 236 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 CD300LBA8K4G0 201 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 HPGDSO60760 199 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 ALDOBP05062 364 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 AZGP1P25311 298 aaKnown RBP17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 CD40P25942 277 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 CFPP27918 469 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 HTR2CP28335 458 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 ZNF93P35789 620 aaPredicted RBP17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 RAB11BQ15907 218 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 TMEM108Q6UXF1 575 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 SORCS2Q96PQ0 1159 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 MIXL1Q9H2W2 232 aa17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 METTL17Q9H7H0 456 aaPredicted RBP17.56■□□□□ 0.4
VCPKMT-202ENST00000395860 CD37P11049 281 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 TNFSF8P32971 234 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 PEX19P40855 299 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 OR2T2Q6IF00 324 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 MOB3CQ70IA8 216 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 ZNF843Q8N446 348 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 BHLHE23Q8NDY6 225 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 OR6M1Q8NGM8 313 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 OR5H6Q8NGV6 325 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 LGALS14Q8TCE9 139 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 UBASH3BQ8TF42 649 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 PIGTQ969N2 578 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 SPACA5Q96QH8 159 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 PAPOLGQ9BWT3 736 aaKnown RBP17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 CXorf56Q9H5V9 222 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 NEK6Q9HC98 313 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 NGBQ9NPG2 151 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 AKIP1Q9NQ31 210 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 ADAM30Q9UKF2 790 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 SPATA2Q9UM82 520 aa17.55■□□□□ 0.4
VCPKMT-202ENST00000395860 KALRNO60229 2985 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 INHBBP09529 407 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 CALCBP10092 127 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 BMP4P12644 408 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 RAC2P15153 192 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 PTAFRP25105 342 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 SNTB2Q13425 540 aaKnown RBP17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 P2RY14Q15391 338 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 C1orf100Q5SVJ3 147 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 LYPD6Q86Y78 171 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 CDH26Q8IXH8 852 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 SAMD12Q8N8I0 201 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 KLF14Q8TD94 323 aaPredicted RBP17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 MARS2Q96GW9 593 aaKnown RBP17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 WDFY2Q96P53 400 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 TECTBQ96PL2 329 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 GPER1Q99527 375 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 UQCC2Q9BRT2 126 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 CNTD2Q9H8S5 307 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 HMG20AQ9NP66 347 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 NDRG3Q9UGV2 375 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 NBASA2RRP1 2371 aa17.54■□□□□ 0.4
VCPKMT-202ENST00000395860 ANKRD30BLA7E2S9 258 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 ZNF850A8MQ14 1090 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 CLDN25C9JDP6 229 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 CST4P01036 141 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 PRF1P14222 555 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 GRNP28799 593 aaKnown RBP17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 PLCXD3Q63HM9 321 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 FAM166AQ6J272 317 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 SPSB1Q96BD6 273 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 RADILQ96JH8 1075 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 PPP1R3EQ9H7J1 279 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 DIDO1Q9BTC0 2240 aaKnown RBP17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 HCFC1P51610 2035 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 FAM25AB3EWG3 89 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 FAM25CB3EWG5 89 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 FAM25GB3EWG6 89 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 ZG16O60844 167 aa17.53■□□□□ 0.4
VCPKMT-202ENST00000395860 SELEP16581 610 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms