RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 TACSTD2P09758 323 aa16.8■□□□□ 0.28
SNCA-203ENST00000394986 FAHP16930 419 aa16.8■□□□□ 0.28
SNCA-203ENST00000394986 GNALP38405 381 aa16.8■□□□□ 0.28
SNCA-203ENST00000394986 PMELP40967 661 aa16.8■□□□□ 0.28
SNCA-203ENST00000394986 ETV1P50549 477 aa16.8■□□□□ 0.28
SNCA-203ENST00000394986 NANOS3P60323 173 aaKnown RBP16.8■□□□□ 0.28
SNCA-203ENST00000394986 PRDX4Q13162 271 aa16.8■□□□□ 0.28
SNCA-203ENST00000394986 BPIFB6Q8NFQ5 453 aa16.8■□□□□ 0.28
SNCA-203ENST00000394986 OR2G2Q8NGZ5 317 aa16.8■□□□□ 0.28
SNCA-203ENST00000394986 PIGCQ92535 297 aa16.8■□□□□ 0.28
SNCA-203ENST00000394986 NOP16Q9Y3C1 178 aaKnown RBP16.8■□□□□ 0.28
SNCA-203ENST00000394986 WIPI2Q9Y4P8 454 aa16.8■□□□□ 0.28
SNCA-203ENST00000394986 MED13LQ71F56 2210 aa16.8■□□□□ 0.28
SNCA-203ENST00000394986 CYB5R3P00387 301 aaPredicted RBP16.79■□□□□ 0.28
SNCA-203ENST00000394986 MAP2K3P46734 347 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 HOXA4Q00056 320 aaPredicted RBP16.79■□□□□ 0.28
SNCA-203ENST00000394986 TMEM249Q2WGJ8 235 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 DMRTC1Q5HYR2 192 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 CLEC9AQ6UXN8 241 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 KCTD20Q7Z5Y7 419 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 WDR86Q86TI4 376 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 BIVMQ86UB2 503 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 RDH10Q8IZV5 341 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 SEMA6DQ8NFY4 1073 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 OR8S1Q8NH09 359 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 PIGLQ9Y2B2 252 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 CR1P17927 2039 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 MTORP42345 2549 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.79■□□□□ 0.28
SNCA-203ENST00000394986 ZNF816-ZNF321PA0A0X1KG74 233 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 A6NIN4 97 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 E9PI62 339 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 LMX1BO60663 402 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 DHRS3O75911 302 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 ZNF205O95201 554 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 CST4P01036 141 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 GRPP07492 148 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 HTR1AP08908 422 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 DCKP27707 260 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 VHLP40337 213 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 AHSA2Q719I0 299 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 KLBQ86Z14 1044 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 SYS1Q8N2H4 156 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 FTMTQ8N4E7 242 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 CELF2-AS1Q8N7Q2 184 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 PLPP7Q8NBV4 271 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 OR14K1Q8NGZ2 314 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 CLDND2Q8NHS1 167 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 ITPKCQ96DU7 683 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 MRPL48Q96GC5 212 aaKnown RBP16.79■□□□□ 0.28
SNCA-203ENST00000394986 JAM3Q9BX67 310 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 FGF23Q9GZV9 251 aaPredicted RBP16.79■□□□□ 0.28
SNCA-203ENST00000394986 FRRS1LQ9P0K9 344 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 CLEC2DQ9UHP7 191 aa16.79■□□□□ 0.28
SNCA-203ENST00000394986 DIMT1Q9UNQ2 313 aaKnown RBP16.79■□□□□ 0.28
SNCA-203ENST00000394986 IRGMA1A4Y4 181 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 ISPDA4D126 451 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 CCL1P22362 96 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 GATA4P43694 442 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 RIPPLY1Q0D2K3 151 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 ST3GAL4Q11206 333 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 CEP78Q5JTW2 689 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 FAM201AQ5SY85 155 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 OR2G6Q5TZ20 316 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 DOK3Q7L591 496 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 HPSE2Q8WWQ2 592 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 TIMD4Q96H15 378 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 TMEM80Q96HE8 168 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 ANKRD60Q9BZ19 345 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 PSORS1C1Q9UIG5 152 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 V9GYS6 101 aa16.78■□□□□ 0.28
SNCA-203ENST00000394986 A0A1B0GVI7 797 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 LOC107986453A0A1B0GWG9 222 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 TMEM178BH3BS89 294 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 SYT7O43581 403 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 IGHV4-31P0DP07 118 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 ATP6V1B1P15313 513 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 MYF6P23409 242 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 THBS2P35442 1172 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 CHN2P52757 468 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 SLC3A1Q07837 685 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 SNCBQ16143 134 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 C6orf141Q5SZD1 244 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 FDX2Q6P4F2 183 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 ZNF826PQ6ZT77 177 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 ZDHHC23Q8IYP9 409 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 SPERTQ8NA61 448 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 OR5P3Q8WZ94 311 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 RAB1CQ92928 201 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 PLCXD1Q9NUJ7 323 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 EXOSC1Q9Y3B2 195 aaKnown RBP16.77■□□□□ 0.27
SNCA-203ENST00000394986 MPC1Q9Y5U8 109 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 NPTNQ9Y639 398 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 CSPG4Q6UVK1 2322 aa16.77■□□□□ 0.27
SNCA-203ENST00000394986 EFCAB10A6NFE3 127 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 A6NLC8 198 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 ANXA2P2A6NMY6 339 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 SLC1A7O00341 560 aa16.76■□□□□ 0.27
SNCA-203ENST00000394986 MTRF1O75570 445 aaKnown RBP16.76■□□□□ 0.27
SNCA-203ENST00000394986 PTBP3O95758 552 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 231.7 ms