RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 SEMG2Q02383 582 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 TSC22D1Q15714 1073 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 HADHQ16836 314 aaKnown RBP0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 ZNF829Q3KNS6 432 aaPredicted RBP0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 ZNF678Q5SXM1 525 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 TMEM107Q6UX40 140 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 Q6ZQT7 251 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 FA2HQ7L5A8 372 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 NIPA1Q7RTP0 329 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 PDPNQ86YL7 162 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 DRAM1Q8N682 238 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 DNAAF3Q8N9W5 541 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 OR4D6Q8NGJ1 314 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 OR1S1Q8NH92 325 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 GPR119Q8TDV5 335 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 ZNF606Q8WXB4 792 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 KCNS1Q96KK3 526 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 PRRC1Q96M27 445 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 PEBP4Q96S96 227 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 TXNDC17Q9BRA2 123 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 ERP44Q9BS26 406 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 SFXN3Q9BWM7 321 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 ROPN1BQ9BZX4 212 aaPredicted RBP0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 LRRC40Q9H9A6 602 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 MRPL16Q9NX20 251 aaKnown RBP0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 NAGKQ9UJ70 344 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 ICE1Q9Y2F5 2266 aa0.34□□□□□ -2.36
SNORD28B-201ENST00000390993 DOCK10Q96BY6 2186 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 DENND4AQ7Z401 1863 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 DYSFO75923 2080 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 VWA8A3KMH1 1905 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 LOC102724200A0A096LPH7 203 aaPredicted RBP0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 A0A1W2PNM2 257 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 C19orf71A6NCJ1 209 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 LEUTXA8MZ59 168 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 C9JQL5 133 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 H7C1H1 209 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 SCAMP2O15127 329 aaKnown RBP0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 CTNSO60931 367 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 CDH16O75309 829 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 CLDN11O75508 207 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 FLOT1O75955 427 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 CXorf1O96002 111 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 IL1BP01584 269 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 SNRPAP09012 282 aaKnown RBP0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 OR5AC1P0C628 307 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 PTHLHP12272 177 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 GLRA2P23416 452 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 HNRNPH3P31942 346 aaKnown RBP0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 MAGEA6P43360 314 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 IFNAR2P48551 515 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 RAB7AP51149 207 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 NDUFA8P51970 172 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 ZNF140P52738 457 aaPredicted RBP0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 ZNF121P58317 390 aaPredicted RBP0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 ADIGQ0VDE8 80 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 CHIT1Q13231 466 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 TRAM2Q15035 370 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 SS18Q15532 418 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 CST6Q15828 149 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 KRTAP25-1Q3LHN0 102 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 KRTAP5-10Q6L8G5 202 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 REEP3Q6NUK4 255 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 RNASEKQ6P5S7 137 aaKnown RBP0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 COMTD1Q86VU5 262 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 C3orf22Q8N5N4 141 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 OR56B2PQ8NGI1 322 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 RNASE11Q8TAA1 199 aaKnown RBP0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 BLNKQ8WV28 456 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 KIFAP3Q92845 792 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 ALS2CR12Q96Q35 445 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 GPR21Q99679 349 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 CENPKQ9BS16 269 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 CALN1Q9BXU9 219 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 KIR3DX1Q9H7L2 352 aa0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 LIN28AQ9H9Z2 209 aaKnown RBP0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 HELZ2Q9BYK8 2649 aaKnown RBP0.33□□□□□ -2.36
SNORD28B-201ENST00000390993 RP1L1Q8IWN7 2480 aaPredicted RBP0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 NPHP4O75161 1426 aaPredicted RBP0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 IGKV1-27A0A075B6S5 117 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 TMEM72A0PK05 275 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 GMNCA6NCL1 334 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ERICH4A6NGS2 130 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ZNF860A6NHJ4 632 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 IGLL5B9A064 214 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 C9JVG2 144 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 K7ERS5 55 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 M0R3G1 203 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 PSPHP1O15172 72 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 CLOCKO15516 846 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 NMT2O60551 498 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 PSIP1O75475 530 aaKnown RBP0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 AQP8O94778 261 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 FARS2O95363 451 aaKnown RBP0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 CGB3P0DN86 165 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 SLC2A3P11169 496 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 ZNF43P17038 809 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 CRABP2P29373 138 aa0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 PBLDP30039 288 aaPredicted RBP0.32□□□□□ -2.36
SNORD28B-201ENST00000390993 GGT2P36268 569 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms