RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 HLA-DPB1P04440 258 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 CD1AP06126 327 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 CELP19835 753 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 PCMT1P22061 227 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 ACHEP22303 614 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 MAGEB1P43366 347 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 PTH2RP49190 550 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 SLC3A1Q07837 685 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 TSTQ16762 297 aaKnown RBP13.15□□□□□ -0.3
PDGFB-202ENST00000381551 PCGF3Q3KNV8 242 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 ZBTB37Q5TC79 503 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 FTMTQ8N4E7 242 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 SVOPQ8N4V2 548 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 OR2Z1Q8NG97 314 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 OR10AC1Q8NH08 325 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 NEU4Q8WWR8 484 aaPredicted RBP13.15□□□□□ -0.3
PDGFB-202ENST00000381551 SORCS2Q96PQ0 1159 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 NR1H4Q96RI1 486 aaPredicted RBP13.15□□□□□ -0.3
PDGFB-202ENST00000381551 COMMD4Q9H0A8 199 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 PPP1R3EQ9H7J1 279 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 ISYNA1Q9NPH2 558 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 ZNF281Q9Y2X9 895 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 ANKRD17O75179 2603 aaKnown RBP13.14□□□□□ -0.31
PDGFB-202ENST00000381551 ZNF816-ZNF321PA0A0X1KG74 233 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 A6NIN4 97 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 LMX1BO60663 402 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 IGHV4-39P01824 125 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 CD55P08174 381 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 ZNF12P17014 697 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 EFNA4P52798 201 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 CCL8P80075 99 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 GPR50Q13585 617 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 TPBGQ13641 420 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 FAM209AQ5JX71 171 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 LRRC75A-AS1Q8N1F1 130 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 OR51A4Q8NGJ6 313 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 PIGCQ92535 297 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 RGP1Q92546 391 aaPredicted RBP13.14□□□□□ -0.31
PDGFB-202ENST00000381551 ELMOD3Q96FG2 381 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 PGLYRP3Q96LB9 341 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 MGLLQ99685 303 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 ZNF696Q9H7X3 374 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 ZNF275Q9NSD4 429 aaPredicted RBP13.14□□□□□ -0.31
PDGFB-202ENST00000381551 ENPP5Q9UJA9 477 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 MPC1Q9Y5U8 109 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 MYO9AB2RTY4 2548 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 NOTCH2Q04721 2471 aa13.14□□□□□ -0.31
PDGFB-202ENST00000381551 CSMD1Q96PZ7 3565 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 ZNF850A8MQ14 1090 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 HPXP02790 462 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 ERCC1P07992 297 aaPredicted RBP13.13□□□□□ -0.31
PDGFB-202ENST00000381551 HSMCR30P0CW71 290 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 FAHP16930 419 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 ATP5J2P56134 94 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 RPS11P62280 158 aaKnown RBP eCLIP13.13□□□□□ -0.31
PDGFB-202ENST00000381551 MLLT11Q13015 90 aaPredicted RBP13.13□□□□□ -0.31
PDGFB-202ENST00000381551 PRDX4Q13162 271 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 OR8G1Q15617 311 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 SPRNQ5BIV9 151 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 UBE2UQ5VVX9 321 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 TMEM42Q69YG0 159 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 ZNF367Q7RTV3 350 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 TSPAN14Q8NG11 270 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 OR10AD1Q8NGE0 317 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 FGGYQ96C11 551 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 C10orf35Q96D05 121 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 PERPQ96FX8 193 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 PAPOLGQ9BWT3 736 aaKnown RBP13.13□□□□□ -0.31
PDGFB-202ENST00000381551 DECR2Q9NUI1 292 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 IL19Q9UHD0 177 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 NOP16Q9Y3C1 178 aaKnown RBP13.13□□□□□ -0.31
PDGFB-202ENST00000381551 ARID1AO14497 2285 aa13.13□□□□□ -0.31
PDGFB-202ENST00000381551 A0A087WXM4 84 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 PNMA8CA0A1B0GUJ8 204 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 F5H5P2 479 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 NCR1O76036 304 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 LY6HO94772 140 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 TNFSF4P23510 183 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 GNALP38405 381 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 TNFAIP6P98066 277 aaPredicted RBP13.12□□□□□ -0.31
PDGFB-202ENST00000381551 MAB21L1Q13394 359 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 YIF1BQ5BJH7 314 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 SPERTQ8NA61 448 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 GPR148Q8TDV2 347 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 OR5P3Q8WZ94 311 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 ITPKCQ96DU7 683 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 ADAT3Q96EY9 351 aaPredicted RBP13.12□□□□□ -0.31
PDGFB-202ENST00000381551 OPALINQ96PE5 141 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 OR2V2Q96R30 315 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 EGLN1Q9GZT9 426 aa13.12□□□□□ -0.31
PDGFB-202ENST00000381551 LOC100289279A0A1B0GTE1 492 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 NRASP01111 189 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 CPEP16870 476 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 COL8A2P25067 703 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 CD200P41217 278 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 CEACAM21Q3KPI0 293 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 ARMCX4Q5H9R4 360 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 CLVS2Q5SYC1 327 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 LIPKQ5VXJ0 399 aa13.11□□□□□ -0.31
PDGFB-202ENST00000381551 MOB3CQ70IA8 216 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms