RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 C11orf88Q6PI97 169 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 DPY19L4Q7Z388 723 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 LY6G5BQ8NDX9 201 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 LRRC29Q8WV35 223 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 C12orf43Q96C57 262 aaKnown RBP13.15□□□□□ -0.3
VCX3A-201ENST00000381089 PYURFQ96I23 114 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 DHRS1Q96LJ7 313 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 CCL13Q99616 98 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 SIRT7Q9NRC8 400 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 MRPL22Q9NWU5 206 aaKnown RBP13.15□□□□□ -0.3
VCX3A-201ENST00000381089 N6AMT1Q9Y5N5 214 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 DIRAS1O95057 198 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 ALX3O95076 343 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 GADD45GO95257 159 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 OTX1P32242 354 aaPredicted RBP13.14□□□□□ -0.31
VCX3A-201ENST00000381089 SPIBQ01892 262 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.14□□□□□ -0.31
VCX3A-201ENST00000381089 HERPUD1Q15011 391 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 PCK2Q16822 640 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 WDR38Q5JTN6 314 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 NCR3LG1Q68D85 454 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 REC114Q7Z4M0 266 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 OR52L1Q8NGH7 329 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 OR2T4Q8NH00 348 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 KCNJ15Q99712 375 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 SEMA6AQ9H2E6 1030 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 SP140LQ9H930 580 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 FBLN5Q9UBX5 448 aa13.14□□□□□ -0.31
VCX3A-201ENST00000381089 MEIOCA2RUB1 952 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 NKX6-3A6NJ46 265 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 RNASEK-C17orf49H0YIS7 233 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 OPN1MWP04001 364 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 OPN1MW2P0DN77 364 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 OPN1MW3P0DN78 364 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 SLC15A1P46059 708 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 PRKXP51817 358 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 IKZF1Q13422 519 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 BLMHQ13867 455 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 SNCBQ16143 134 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 SLC35F1Q5T1Q4 408 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 DCXRQ7Z4W1 244 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 ZDHHC21Q8IVQ6 265 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 DTX3Q8N9I9 347 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 H1FXQ92522 213 aaKnown RBP13.13□□□□□ -0.31
VCX3A-201ENST00000381089 C7orf34Q96L11 122 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 FAM234AQ9H0X4 552 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 PPA2Q9H2U2 334 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 CENPMQ9NSP4 180 aa13.13□□□□□ -0.31
VCX3A-201ENST00000381089 DHRS12A0PJE2 317 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 AQP12BA6NM10 295 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 PIN1P1O15428 100 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 TBX1O43435 398 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 FCN3O75636 299 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 SEMG1P04279 462 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 SPARCP09486 303 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 CFL1P23528 166 aaKnown RBP13.12□□□□□ -0.31
VCX3A-201ENST00000381089 PYCR1P32322 319 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 GNALP38405 381 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 RPS27P42677 84 aaKnown RBP13.12□□□□□ -0.31
VCX3A-201ENST00000381089 ACSM1Q08AH1 577 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 DBPQ10586 325 aaPredicted RBP13.12□□□□□ -0.31
VCX3A-201ENST00000381089 TIGD6Q17RP2 521 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 BEAN1Q3B7T3 259 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 SLC35E4Q6ICL7 350 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 RPL13AP3Q6NVV1 102 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 PGBD2Q6P3X8 592 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 AQP12AQ8IXF9 295 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 ADGRG5Q8IZF4 528 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 FTMTQ8N4E7 242 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 FAM216BQ8N7L0 139 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 OR1M1Q8NGA1 313 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 SPSB4Q96A44 273 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 RAB3IPQ96QF0 476 aaPredicted RBP13.12□□□□□ -0.31
VCX3A-201ENST00000381089 FUZQ9BT04 418 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 DCTN5Q9BTE1 182 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 DNTTIP1Q9H147 329 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 RAB18Q9NP72 206 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 DNAJB11Q9UBS4 358 aa13.12□□□□□ -0.31
VCX3A-201ENST00000381089 A0A1W2PRD5 423 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 A0A1W2PRF3 423 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 A0A1W2PRM7 423 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 TVP23AA6NH52 213 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 ZNF878C9JN71 531 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 G3V4G9 280 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 APOC1P02654 83 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 FABP3P05413 133 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 ANXA2P07355 339 aaKnown RBP13.11□□□□□ -0.31
VCX3A-201ENST00000381089 SLC2A1P11166 492 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 HSD11B1P28845 292 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 FMO3P31513 532 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 SAA4P35542 130 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 ENTPD1P49961 510 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 UBE2E1P51965 193 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 GRB2P62993 217 aaKnown RBP13.11□□□□□ -0.31
VCX3A-201ENST00000381089 KPNB1Q14974 876 aaKnown RBP13.11□□□□□ -0.31
VCX3A-201ENST00000381089 FAM98BQ52LJ0 330 aaKnown RBP13.11□□□□□ -0.31
VCX3A-201ENST00000381089 WDR82Q6UXN9 313 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 C1orf122Q6ZSJ8 110 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 CYB561A3Q8NBI2 242 aa13.11□□□□□ -0.31
VCX3A-201ENST00000381089 OR4C13Q8NGP0 309 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms