RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 LILRB4Q8NHJ6 448 aa21.18■□□□□ 0.98
ECHDC3-201ENST00000379215 ERRFI1Q9UJM3 462 aaPredicted RBP21.18■□□□□ 0.98
ECHDC3-201ENST00000379215 SPEF1Q9Y4P9 236 aa21.18■□□□□ 0.98
ECHDC3-201ENST00000379215 IGHV2OR16-5A0A0B4J2B6 119 aa21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 HPGDSO60760 199 aa21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 ZNF93P35789 620 aaPredicted RBP21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 TALDO1P37837 337 aa21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 ZNF83P51522 516 aa21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 NAAAQ02083 359 aa21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 TNK1Q13470 666 aa21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 FAM166AQ6J272 317 aa21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 SAMD12Q8N8I0 201 aa21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 OR56B2PQ8NGI1 322 aa21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 OR52N4Q8NGI2 321 aa21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 LGALS14Q8TCE9 139 aa21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 CCDC120Q96HB5 630 aa21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 DIRAS2Q96HU8 199 aa21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 MIXL1Q9H2W2 232 aa21.17■□□□□ 0.98
ECHDC3-201ENST00000379215 M0R1B8 84 aa21.16■□□□□ 0.98
ECHDC3-201ENST00000379215 NRASP01111 189 aa21.16■□□□□ 0.98
ECHDC3-201ENST00000379215 CRYAAP02489 173 aa21.16■□□□□ 0.98
ECHDC3-201ENST00000379215 APOA1P02647 267 aa21.16■□□□□ 0.98
ECHDC3-201ENST00000379215 SNRPBP14678 240 aaKnown RBP21.16■□□□□ 0.98
ECHDC3-201ENST00000379215 ADORA2A-AS1P86434 159 aa21.16■□□□□ 0.98
ECHDC3-201ENST00000379215 C4orf17Q53FE4 359 aa21.16■□□□□ 0.98
ECHDC3-201ENST00000379215 METAP1DQ6UB28 335 aaPredicted RBP21.16■□□□□ 0.98
ECHDC3-201ENST00000379215 LYPD6Q86Y78 171 aa21.16■□□□□ 0.98
ECHDC3-201ENST00000379215 PNLDC1Q8NA58 520 aaKnown RBP21.16■□□□□ 0.98
ECHDC3-201ENST00000379215 RNASE6Q93091 150 aaKnown RBP21.16■□□□□ 0.98
ECHDC3-201ENST00000379215 BORCS5Q969J3 196 aa21.16■□□□□ 0.98
ECHDC3-201ENST00000379215 NGBQ9NPG2 151 aa21.16■□□□□ 0.98
ECHDC3-201ENST00000379215 GMDSO60547 372 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 PAHP00439 452 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 CST4P01036 141 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 FAM157BP0CG42 384 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 RAC2P15153 192 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 AZGP1P25311 298 aaKnown RBP21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 CD40LGP29965 261 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 UBE2V2Q15819 145 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 UBE2NLQ5JXB2 153 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 OR1J1Q8NGS3 322 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 SLC7A11Q9UPY5 501 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 IGKV1-9A0A0C4DH69 117 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 CD300LBA8K4G0 201 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 FAM25AB3EWG3 89 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 FAM25CB3EWG5 89 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 FAM25GB3EWG6 89 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 PTBP1P26599 531 aaKnown RBP eCLIP21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 HLXQ14774 488 aaPredicted RBP21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 UBASH3BQ8TF42 649 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 CA5BP1Q8WTZ4 195 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 OR51B6Q9H340 312 aa21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 CGGBP1Q9UFW8 167 aaPredicted RBP21.15■□□□□ 0.98
ECHDC3-201ENST00000379215 LOC100289279A0A1B0GTE1 492 aa21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 ANKRD30BLA7E2S9 258 aa21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 TLE1Q04724 770 aa21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 DCTN2Q13561 401 aaKnown RBP21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 TMEM108Q6UXF1 575 aa21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 FAM3DQ96BQ1 224 aa21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 POFUT1Q9H488 388 aa21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 PALMDQ9NP74 551 aa21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 GPR173Q9NS66 373 aa21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 CYSLTR2Q9NS75 346 aa21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 NPAP1Q9NZP6 1156 aa21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 RABL2AQ9UBK7 228 aaPredicted RBP21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 OR5V1Q9UGF6 321 aa21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 RABL2BQ9UNT1 228 aa21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 USP24Q9UPU5 2620 aa21.14■□□□□ 0.97
ECHDC3-201ENST00000379215 FAM90A27PA6NNH2 459 aa21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 ARSBP15848 533 aa21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 EVX1P49640 407 aa21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 PPP5CP53041 499 aa21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 CLDN12P56749 244 aa21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 SEZ6L2Q6UXD5 910 aa21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 LHFPL2Q6ZUX7 228 aa21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 PRR7Q8TB68 274 aa21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 SLC25A40Q8TBP6 338 aa21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 SSC4DQ8WTU2 575 aa21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 RAB40AQ8WXH6 277 aa21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 GPER1Q99527 375 aa21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 PAPOLGQ9BWT3 736 aaKnown RBP21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 OR2J1Q9GZK6 312 aa21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 CNTD2Q9H8S5 307 aa21.13■□□□□ 0.97
ECHDC3-201ENST00000379215 A0A0B4J203 849 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 FABP12A6NFH5 140 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 UBBP0CG47 229 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 PTAFRP25105 342 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 FUT6P51993 359 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 SORDQ00796 357 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 KISS1Q15726 138 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 CNIH2Q6PI25 160 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 BAIAP2L2Q6UXY1 529 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 OR5H6Q8NGV6 325 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 PIGCQ92535 297 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 SLC25A28Q96A46 364 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 KCNJ16Q9NPI9 418 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 MRPL15Q9P015 296 aaKnown RBP21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 GHRLQ9UBU3 117 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 RHBDD3Q9Y3P4 386 aa21.12■□□□□ 0.97
ECHDC3-201ENST00000379215 MPC1Q9Y5U8 109 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms