RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 ZNF787Q6DD87 383 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 OR2T2Q6IF00 324 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 SUMF1Q8NBK3 374 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 RXFP4Q8TDU9 374 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 SLC25A38Q96DW6 304 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 DHCR7Q9UBM7 475 aaKnown RBP7.85□□□□□ -1.15
PCDH9-202ENST00000377865 MCTS1Q9ULC4 181 aaKnown RBP7.85□□□□□ -1.15
PCDH9-202ENST00000377865 FAM96BQ9Y3D0 163 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 CCDC85CA6NKD9 419 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 CTSDP07339 412 aaPredicted RBP7.85□□□□□ -1.15
PCDH9-202ENST00000377865 CD79AP11912 226 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 KCNAB1Q14722 419 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 C1QTNF6Q9BXI9 259 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 TSC2P49815 1807 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 CCDC163A0A0D9SF12 145 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 A0A1B0GTH9 108 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 LILRA5A6NI73 299 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 H0Y8X5 98 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 PLPP3O14495 311 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 CTGFP29279 349 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 P2RY1P47900 373 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 JMJD6Q6NYC1 403 aaPredicted RBP7.85□□□□□ -1.15
PCDH9-202ENST00000377865 IL1F10Q8WWZ1 152 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 VSTM2LQ96N03 204 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 EMC6Q9BV81 110 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 PLK3Q9H4B4 646 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 LHX9Q9NQ69 397 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 GNG13Q9P2W3 67 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 WDR81Q562E7 1941 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 H7BYZ3 331 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 M0R135 149 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 GATCO43716 136 aaKnown RBP7.85□□□□□ -1.15
PCDH9-202ENST00000377865 SCRG1O75711 98 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 CRYBA1P05813 215 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 TCN2P20062 427 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 UBE2NP61088 152 aaKnown RBP7.85□□□□□ -1.15
PCDH9-202ENST00000377865 BATFQ16520 125 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 RABEPKQ7Z6M1 372 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 ZNF799Q96GE5 643 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 WFDC6Q9BQY6 131 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 FBXL17Q9UF56 701 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 TRAV8-7A0A075B6U6 113 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 OR2M5A3KFT3 312 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 SEC14L6B5MCN3 397 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 KLF4O43474 513 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 TXNDC12O95881 172 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 SPP1P10451 314 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 SHBQ15464 509 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 SMAD2Q15796 467 aaKnown RBP7.85□□□□□ -1.15
PCDH9-202ENST00000377865 PRR18Q8N4B5 295 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 PPP1R35Q8TAP8 253 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 SPSB1Q96BD6 273 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 OR51I2Q9H344 312 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 VSIG4Q9Y279 399 aa7.85□□□□□ -1.15
PCDH9-202ENST00000377865 TRBV5-7A0A0A0MS05 114 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 HSBP1L1C9JCN9 74 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 XRCC2O43543 280 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 CLDN1O95832 211 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 MBPP02686 304 aaPredicted RBP7.84□□□□□ -1.15
PCDH9-202ENST00000377865 GLAP06280 429 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 FGF7P21781 194 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 ACAA2P42765 397 aaKnown RBP7.84□□□□□ -1.15
PCDH9-202ENST00000377865 SSTP61278 116 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 CEBPEQ15744 281 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 AWAT1Q58HT5 328 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 DCAF12L2Q5VW00 463 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 CLEC18BQ6UXF7 455 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 ETFBKMTQ8IXQ9 262 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 OR10J5Q8NHC4 309 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 ASB10Q8WXI3 467 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 TMEM18Q96B42 140 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 ARHGAP5-AS1Q96IT6 56 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 NAA60Q9H7X0 242 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 HDGFL3Q9Y3E1 203 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 TRIP12Q14669 1992 aaPredicted RBP7.84□□□□□ -1.15
PCDH9-202ENST00000377865 CCDC187A0A096LP49 1063 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 A6NLC8 198 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 A8MXK9 166 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 ALG1L2C9J202 215 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 ABOP16442 354 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 RAB5AP20339 215 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 THBS3P49746 956 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 NOVA1P51513 510 aaKnown RBP7.84□□□□□ -1.15
PCDH9-202ENST00000377865 ZP1P60852 638 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 PPP1R3BQ86XI6 285 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 OR4C3Q8NH37 302 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 CPT1CQ8TCG5 803 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 MOGAT1Q96PD6 335 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 MED29Q9NX70 200 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 A0A0U1RQK1 487 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 ZNF814B7Z6K7 855 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 SNCAP37840 140 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 NANOS3P60323 173 aaKnown RBP7.84□□□□□ -1.15
PCDH9-202ENST00000377865 PSG6Q00889 435 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 CST9LP1Q5W188 147 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 GGNBP1Q5YKI7 109 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 LIPHQ8WWY8 451 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 CMBLQ96DG6 245 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 REEP6Q96HR9 211 aa7.84□□□□□ -1.15
PCDH9-202ENST00000377865 SPACA5Q96QH8 159 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms