RNA–Protein interactions for RNA: ENST00000376324.7

CHRDL2-202, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,665 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-202ENST00000376324 NEUROG1Q92886 237 aa12.68□□□□□ -0.38
CHRDL2-202ENST00000376324 NKX3-1Q99801 234 aaPredicted RBP12.68□□□□□ -0.38
CHRDL2-202ENST00000376324 PAPOLGQ9BWT3 736 aaKnown RBP12.68□□□□□ -0.38
CHRDL2-202ENST00000376324 DUSP13Q9UII6 198 aa12.68□□□□□ -0.38
CHRDL2-202ENST00000376324 TRAV1-2A0A0B4J238 106 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 ZNF816-ZNF321PA0A0X1KG74 233 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 ZNF850A8MQ14 1090 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 PRSS44E7EML9 344 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 TIMM8AO60220 97 aaPredicted RBP12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 PLAUP00749 431 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 IGFBP3P17936 291 aaPredicted RBP12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 RAB3BP20337 219 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 DDOSTP39656 456 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 HNRNPA0Q13151 305 aaKnown RBP12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 TMEM255AQ5JRV8 349 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 MEX3BQ6ZN04 569 aaKnown RBP12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 MOB3CQ70IA8 216 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 LRRTM1Q86UE6 522 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 LRP11Q86VZ4 500 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 HAVCR1Q96D42 359 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 HS3ST6Q96QI5 342 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 SYT3Q9BQG1 590 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 SLC30A2Q9BRI3 323 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 KCNN3Q9UGI6 736 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 GPR160Q9UJ42 338 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 FOXJ3Q9UPW0 622 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 ANXA2P2A6NMY6 339 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 DHRS7CA6NNS2 312 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 DEFB108AA8MXU0 73 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 SHISA9B4DS77 424 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 GMDSO60547 372 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 NRASP01111 189 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 IL1AP01583 271 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 ADRA2CP18825 462 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 FSTP19883 344 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 RAB3AP20336 220 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 RPS23P62266 143 aaKnown RBP12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 UBE2V2Q15819 145 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 CLVS2Q5SYC1 327 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 DMRTC2Q8IXT2 367 aaPredicted RBP12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 CSNK2A3Q8NEV1 391 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 SYNPRQ8TBG9 265 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 TRMT10AQ8TBZ6 339 aaKnown RBP12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 DYNC2LI1Q8TCX1 351 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 TMEM171Q8WVE6 324 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 PP6455Q8WZ26 134 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 DVL3Q92997 716 aaPredicted RBP12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 CHST5Q9GZS9 411 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 CA10Q9NS85 328 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 PURGQ9UJV8 347 aaKnown RBP12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 RNF115Q9Y4L5 304 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 ABCA4P78363 2273 aa12.67□□□□□ -0.38
CHRDL2-202ENST00000376324 A1L4Q6 167 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 ANKRD30BLA7E2S9 258 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 PDCD5O14737 125 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 SULT1B1O43704 296 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 HCKP08631 526 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 SELEP16581 610 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 ATF1P18846 271 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 TUBG1P23258 451 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 BDKRB2P30411 391 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 PEX19P40855 299 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 PRDX4Q13162 271 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 MBNL2Q5VZF2 373 aaKnown RBP12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 PLCXD3Q63HM9 321 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 TPRA1Q86W33 373 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 NR2C2APQ86WQ0 139 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 C1orf174Q8IYL3 243 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 NUP37Q8NFH4 326 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 PIGTQ969N2 578 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 C10orf35Q96D05 121 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 SPACA5Q96QH8 159 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 GFI1Q99684 422 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 TUBG2Q9NRH3 451 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 CMAHPQ9Y471 501 aa12.66□□□□□ -0.38
CHRDL2-202ENST00000376324 IGKV1-9A0A0C4DH69 117 aa12.65□□□□□ -0.38
CHRDL2-202ENST00000376324 CA6P23280 308 aa12.65□□□□□ -0.38
CHRDL2-202ENST00000376324 DDI2Q5TDH0 399 aa12.65□□□□□ -0.38
CHRDL2-202ENST00000376324 FTMTQ8N4E7 242 aa12.65□□□□□ -0.38
CHRDL2-202ENST00000376324 OR52N4Q8NGI2 321 aa12.65□□□□□ -0.38
CHRDL2-202ENST00000376324 FAM222BQ8WU58 562 aa12.65□□□□□ -0.38
CHRDL2-202ENST00000376324 MRPL37Q9BZE1 423 aaKnown RBP12.65□□□□□ -0.38
CHRDL2-202ENST00000376324 BARHL1Q9BZE3 327 aa12.65□□□□□ -0.38
CHRDL2-202ENST00000376324 MYEF2Q9P2K5 600 aaKnown RBP12.65□□□□□ -0.38
CHRDL2-202ENST00000376324 CGGBP1Q9UFW8 167 aaPredicted RBP12.65□□□□□ -0.38
CHRDL2-202ENST00000376324 FAM230AA0A1W2PPH8 454 aa12.64□□□□□ -0.39
CHRDL2-202ENST00000376324 TRIM64BA6NI03 449 aa12.64□□□□□ -0.39
CHRDL2-202ENST00000376324 IQCF6A8MYZ5 107 aa12.64□□□□□ -0.39
CHRDL2-202ENST00000376324 E7EQL1 145 aa12.64□□□□□ -0.39
CHRDL2-202ENST00000376324 SLC2A2P11168 524 aaPredicted RBP12.64□□□□□ -0.39
CHRDL2-202ENST00000376324 ZNF250P15622 560 aa12.64□□□□□ -0.39
CHRDL2-202ENST00000376324 IGFBP2P18065 325 aa12.64□□□□□ -0.39
CHRDL2-202ENST00000376324 AZGP1P25311 298 aaKnown RBP12.64□□□□□ -0.39
CHRDL2-202ENST00000376324 LOXP28300 417 aaPredicted RBP12.64□□□□□ -0.39
CHRDL2-202ENST00000376324 RORCP51449 518 aa12.64□□□□□ -0.39
CHRDL2-202ENST00000376324 KLF3P57682 345 aaPredicted RBP12.64□□□□□ -0.39
CHRDL2-202ENST00000376324 IDNKQ5T6J7 187 aa12.64□□□□□ -0.39
CHRDL2-202ENST00000376324 HES5Q5TA89 166 aa12.64□□□□□ -0.39
CHRDL2-202ENST00000376324 ZBTB37Q5TC79 503 aa12.64□□□□□ -0.39
CHRDL2-202ENST00000376324 UTS2BQ765I0 119 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms