RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 FAM234AQ9H0X4 552 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 B3GAT1Q9P2W7 334 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 LSM2Q9Y333 95 aaKnown RBP10.35□□□□□ -0.75
PTCH1-203ENST00000375274 LINC00862A6NCI5 91 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 ANKUB1A6NFN9 424 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 LMO7DNF2Z398 122 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 CXCL13O43927 109 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 SCAF4O95104 1147 aaKnown RBP10.35□□□□□ -0.75
PTCH1-203ENST00000375274 EPPINO95925 133 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 NME1P15531 152 aaKnown RBP10.35□□□□□ -0.75
PTCH1-203ENST00000375274 HOXA1P49639 335 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-203ENST00000375274 SHHQ15465 462 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.35□□□□□ -0.75
PTCH1-203ENST00000375274 SP6Q3SY56 376 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 ZNF770Q6IQ21 691 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-203ENST00000375274 HPSE2Q8WWQ2 592 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 ARHGAP5-AS1Q96IT6 56 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 RAB18Q9NP72 206 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 GCM2O75603 506 aaPredicted RBP10.35□□□□□ -0.75
PTCH1-203ENST00000375274 GRPP07492 148 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 SFTA3P0C7M3 94 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 GLB1P16278 677 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 NPEPL1Q8NDH3 523 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 DAZAP1Q96EP5 407 aaKnown RBP10.35□□□□□ -0.75
PTCH1-203ENST00000375274 LRRC61Q9BV99 259 aa10.35□□□□□ -0.75
PTCH1-203ENST00000375274 FIGNL2A6NMB9 653 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 SPINT2O43291 252 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 PDGFBP01127 241 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-203ENST00000375274 GLAP06280 429 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 PSG6Q00889 435 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 RAB32Q13637 225 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 LYPD8Q6UX82 237 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 ZNF808Q8N4W9 903 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-203ENST00000375274 CXorf58Q96LI9 332 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 MMP26Q9NRE1 261 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 KCNIP2Q9NS61 270 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 LANCL2Q9NS86 450 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 APC2O95996 2303 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 TCRBV16S1A1N1A0A5B0 115 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 ALG1L2C9J202 215 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 GABRG2P18507 467 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 THBS4P35443 961 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 CLN3Q13286 438 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 GUK1Q16774 197 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 B3GNTL1Q67FW5 361 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-203ENST00000375274 OSR2Q8N2R0 312 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 NOXO1Q8NFA2 376 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-203ENST00000375274 ZNF576Q9H609 170 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 UFSP2Q9NUQ7 469 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 DUSP13Q9UII6 198 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 SIT1Q9Y3P8 196 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 IGHV3-15A0A0B4J1V0 119 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 RD3LP0DJH9 198 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 HTRA4P83105 476 aaPredicted RBP10.34□□□□□ -0.75
PTCH1-203ENST00000375274 MYBPHQ13203 477 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 KISS1Q15726 138 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 Q7L0L9 218 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 H2BFWTQ7Z2G1 175 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 COMMD1Q8N668 190 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 OR2AE1Q8NHA4 323 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 MUCL1Q96DR8 90 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 C1QTNF6Q9BXI9 259 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 ADAM19Q9H013 955 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 SVILO95425 2214 aa10.34□□□□□ -0.75
PTCH1-203ENST00000375274 A0A1W2PPV9 198 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 BTBD17A6NE02 478 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 ZNF732B4DXR9 585 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 CST7O76096 145 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 EDDM3BP56851 147 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 C19orf57Q0VDD7 668 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 KLF9Q13886 244 aaPredicted RBP10.33□□□□□ -0.75
PTCH1-203ENST00000375274 EDDM3AQ14507 147 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 MIDNQ504T8 468 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 KMT5CQ86Y97 462 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 GVQW1Q8N7I0 195 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 C15orf54Q8N8G6 183 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 OR52N4Q8NGI2 321 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 INTS12Q96CB8 462 aaKnown RBP10.33□□□□□ -0.75
PTCH1-203ENST00000375274 RPUSD4Q96CM3 377 aaKnown RBP10.33□□□□□ -0.75
PTCH1-203ENST00000375274 ZNF75AQ96N20 296 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 FAM60AQ9NP50 221 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 ZNF275Q9NSD4 429 aaPredicted RBP10.33□□□□□ -0.75
PTCH1-203ENST00000375274 FRRS1LQ9P0K9 344 aa10.33□□□□□ -0.75
PTCH1-203ENST00000375274 H3BP45 60 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 PTAFRP25105 342 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 VHLLQ6RSH7 139 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 SEZ6L2Q6UXD5 910 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 ZNF705AQ6ZN79 300 aaPredicted RBP10.33□□□□□ -0.76
PTCH1-203ENST00000375274 FBXL14Q8N1E6 418 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 OR5M9Q8NGP3 310 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 C12orf49Q9H741 205 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 PTPRFP10586 1907 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 TRIM64BA6NI03 449 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 OR4C45A6NMZ5 311 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 SHISA8B8ZZ34 492 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 RER1O15258 196 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 SFT2D2O95562 160 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 B4GALT1P15291 398 aa10.33□□□□□ -0.76
PTCH1-203ENST00000375274 NQO2P16083 231 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms