RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 PBOV1Q9GZY1 135 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 C12orf49Q9H741 205 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 HHLA2Q9UM44 414 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 MRPS7Q9Y2R9 242 aaKnown RBP10.54□□□□□ -0.72
USF1-203ENST00000368021 POLEQ07864 2286 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 OR6C6A6NF89 314 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 HLA-DQB1P01920 261 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 TTRP02766 147 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 CRHP06850 196 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 MMP7P09237 267 aaPredicted RBP10.54□□□□□ -0.72
USF1-203ENST00000368021 EDN3P14138 238 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 ZNF32P17041 273 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 RAB3BP20337 219 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 CRYGSP22914 178 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 S100PP25815 95 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 RFX2P48378 723 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 CX3CR1P49238 355 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 ZNF121P58317 390 aaPredicted RBP10.54□□□□□ -0.72
USF1-203ENST00000368021 RAB4BP61018 213 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 ODF4Q2M2E3 257 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 SLC36A2Q495M3 483 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 ZNF585AQ6P3V2 769 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 PRSS45Q7RTY3 260 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 DPPA2Q7Z7J5 298 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 CCDC36Q8IYA8 594 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 OR6K3Q8NGY3 331 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 OR10AC1Q8NH08 325 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 ASB5Q8WWX0 329 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 SPTSSAQ969W0 71 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 PPP1R14AQ96A00 147 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 FYTTD1Q96QD9 318 aaKnown RBP10.54□□□□□ -0.72
USF1-203ENST00000368021 ZNF251Q9BRH9 671 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 PDCD10Q9BUL8 212 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 OR2H1Q9GZK4 316 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 ZCCHC4Q9H5U6 513 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 SMURF1Q9HCE7 757 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 PFDN2Q9UHV9 154 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 PRSS50Q9UI38 385 aa10.54□□□□□ -0.72
USF1-203ENST00000368021 UTP20O75691 2785 aaKnown RBP10.53□□□□□ -0.72
USF1-203ENST00000368021 INTS1Q8N201 2190 aaKnown RBP10.53□□□□□ -0.72
USF1-203ENST00000368021 LOC107986453A0A1B0GWG9 222 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 A0A1W2PPK0 400 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 DOK2O60496 412 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 TSC22D2O75157 780 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 TMEM127O75204 238 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 CD2P06729 351 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 ACSM4P0C7M7 580 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 KIR2DL2P43627 348 aaPredicted RBP10.53□□□□□ -0.72
USF1-203ENST00000368021 PRKXP51817 358 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 ARHGDIBP52566 201 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 PSG4Q00888 419 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 RSPO1Q2MKA7 263 aaPredicted RBP10.53□□□□□ -0.72
USF1-203ENST00000368021 KRTAP27-1Q3LI81 207 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 NR2C2APQ86WQ0 139 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 GCNT2Q8N0V5 402 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 ZNF283Q8N7M2 679 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 ST6GALNAC3Q8NDV1 305 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 OR1F12Q8NHA8 337 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 FAM57AQ8TBR7 257 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 ZNF431Q8TF32 576 aaPredicted RBP10.53□□□□□ -0.72
USF1-203ENST00000368021 TSEN15Q8WW01 171 aaKnown RBP10.53□□□□□ -0.72
USF1-203ENST00000368021 ACOT12Q8WYK0 555 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 KCTD12Q96CX2 325 aaKnown RBP10.53□□□□□ -0.72
USF1-203ENST00000368021 ZFP3Q96NJ6 502 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 SORCS2Q96PQ0 1159 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 KCNS3Q9BQ31 491 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 SLITRK2Q9H156 845 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 SLC17A5Q9NRA2 495 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 RDH8Q9NYR8 311 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 SH3BGRL2Q9UJC5 107 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 DHDHQ9UQ10 334 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 OSGIN2Q9Y236 505 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 BAHCC1Q9P281 2608 aa10.53□□□□□ -0.72
USF1-203ENST00000368021 A0A0G2JK05 382 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 ANKRD61A6NGH8 418 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 M0R135 149 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 PDCD5O14737 125 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 IL18BPO95998 194 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 ITGA5P08648 1049 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 H2AFB1P0C5Y9 115 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 H2AFB2P0C5Z0 115 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 MAGEB1P43366 347 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 SOX2P48431 317 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 FOXG1P55316 489 aaPredicted RBP10.52□□□□□ -0.73
USF1-203ENST00000368021 CAV3P56539 151 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 HACD4Q5VWC8 232 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 RTL6Q6ICC9 239 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 ZNF774Q6NX45 483 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 SFXN4Q6P4A7 337 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 ANKRD16Q6P6B7 361 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 DRAM2Q6UX65 266 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 Q6ZT83 130 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 CD163Q86VB7 1156 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 OR8B12Q8NGG6 310 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 UBASH3BQ8TF42 649 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 ZNF799Q96GE5 643 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 WNT5BQ9H1J7 359 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 TCF7L1Q9HCS4 588 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 BRD7Q9NPI1 651 aa10.52□□□□□ -0.73
USF1-203ENST00000368021 RBFOX1Q9NWB1 397 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms