RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 ACBD4Q8NC06 268 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 OR10R2Q8NGX6 335 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 CASTOR1Q8WTX7 329 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 ASB10Q8WXI3 467 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 ST8SIA1Q92185 356 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 RRNAD1Q96FB5 475 aaKnown RBP13.04□□□□□ -0.32
PRKN-204ENST00000366896 NMES1Q9C002 83 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 RHOFQ9HBH0 211 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 GDF2Q9UK05 429 aaPredicted RBP13.04□□□□□ -0.32
PRKN-204ENST00000366896 ADAMTS20P59510 1910 aa13.04□□□□□ -0.32
PRKN-204ENST00000366896 LOC100509620A0A075B734 347 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 TRAV20A0A0B4J274 112 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 IGHV5-10-1A0A0J9YXX1 117 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 WIPF3A6NGB9 483 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 ZNF705EA8MWA4 302 aaPredicted RBP13.03□□□□□ -0.32
PRKN-204ENST00000366896 UBE2CO00762 179 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 EFSO43281 561 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 STK17BO94768 372 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 S100A9P06702 114 aaKnown RBP13.03□□□□□ -0.32
PRKN-204ENST00000366896 ERCC1P07992 297 aaPredicted RBP13.03□□□□□ -0.32
PRKN-204ENST00000366896 HSD11B2P80365 405 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 C16orf47Q6ZP98 133 aaPredicted RBP13.03□□□□□ -0.32
PRKN-204ENST00000366896 KMT5CQ86Y97 462 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 D2HGDHQ8N465 521 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 ZSCAN4Q8NAM6 433 aaPredicted RBP13.03□□□□□ -0.32
PRKN-204ENST00000366896 OR4D6Q8NGJ1 314 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 MFSD8Q8NHS3 518 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 RNF133Q8WVZ7 376 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 NKD1Q969G9 470 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 KCNK17Q96T54 332 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 PISDQ9UG56 409 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 IGKV1D-43A0A0B4J1Z2 117 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 C2orf72A6NCS6 295 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 C5orf51A6NDU8 294 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 RAB27BO00194 218 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 PTAFRP25105 342 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 SERPINF1P36955 418 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 SLC6A9P48067 706 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 CAV2P51636 162 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 SUMO3P55854 103 aaPredicted RBP13.03□□□□□ -0.32
PRKN-204ENST00000366896 C1orf189Q5VU69 101 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 ASCL5Q7RTU5 278 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 DCXRQ7Z4W1 244 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 TMEM200AQ86VY9 491 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 ADAD2Q8NCV1 583 aaKnown RBP13.03□□□□□ -0.32
PRKN-204ENST00000366896 OR1L3Q8NH93 324 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 NUDCD2Q8WVJ2 157 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 CDC6Q99741 560 aa13.03□□□□□ -0.32
PRKN-204ENST00000366896 SEC16AO15027 2179 aa13.02□□□□□ -0.32
PRKN-204ENST00000366896 COL27A1Q8IZC6 1860 aaPredicted RBP13.02□□□□□ -0.32
PRKN-204ENST00000366896 MS4A18H0YCH9 400 aa13.02□□□□□ -0.32
PRKN-204ENST00000366896 BPNT1O95861 308 aa13.02□□□□□ -0.32
PRKN-204ENST00000366896 VAMP1P23763 118 aa13.02□□□□□ -0.32
PRKN-204ENST00000366896 CX3CR1P49238 355 aa13.02□□□□□ -0.32
PRKN-204ENST00000366896 MS4A18Q3C1V0 323 aa13.02□□□□□ -0.32
PRKN-204ENST00000366896 LANCL3Q6ZV70 420 aa13.02□□□□□ -0.32
PRKN-204ENST00000366896 PIP4P1Q86T03 277 aa13.02□□□□□ -0.32
PRKN-204ENST00000366896 C15orf54Q8N8G6 183 aa13.02□□□□□ -0.32
PRKN-204ENST00000366896 CMBLQ96DG6 245 aa13.02□□□□□ -0.32
PRKN-204ENST00000366896 SAT2Q96F10 170 aaPredicted RBP13.02□□□□□ -0.32
PRKN-204ENST00000366896 CPNE2Q96FN4 548 aaPredicted RBP13.02□□□□□ -0.32
PRKN-204ENST00000366896 SMIM8Q96KF7 97 aa13.02□□□□□ -0.32
PRKN-204ENST00000366896 CCDC74BQ96LY2 380 aa13.02□□□□□ -0.32
PRKN-204ENST00000366896 SEC61A2Q9H9S3 476 aa13.02□□□□□ -0.32
PRKN-204ENST00000366896 SMCO4Q9NRQ5 59 aa13.02□□□□□ -0.32
PRKN-204ENST00000366896 NOSIPQ9Y314 301 aaKnown RBP13.02□□□□□ -0.32
PRKN-204ENST00000366896 KIF26BQ2KJY2 2108 aa13.02□□□□□ -0.33
PRKN-204ENST00000366896 TMEM269A0A1B0GVZ9 245 aa13.02□□□□□ -0.33
PRKN-204ENST00000366896 H0YIZ8 118 aa13.02□□□□□ -0.33
PRKN-204ENST00000366896 P2RY10O00398 339 aa13.02□□□□□ -0.33
PRKN-204ENST00000366896 EIF1BO60739 113 aaKnown RBP13.02□□□□□ -0.33
PRKN-204ENST00000366896 FBLP22087 321 aaKnown RBP13.02□□□□□ -0.33
PRKN-204ENST00000366896 EIF1P41567 113 aaKnown RBP13.02□□□□□ -0.33
PRKN-204ENST00000366896 ARL4DP49703 201 aa13.02□□□□□ -0.33
PRKN-204ENST00000366896 QRFPP83859 136 aa13.02□□□□□ -0.33
PRKN-204ENST00000366896 SHISA6Q6ZSJ9 500 aa13.02□□□□□ -0.33
PRKN-204ENST00000366896 FJX1Q86VR8 437 aa13.02□□□□□ -0.33
PRKN-204ENST00000366896 PLPP5Q8NEB5 264 aa13.02□□□□□ -0.33
PRKN-204ENST00000366896 FAM46BQ96A09 425 aa13.02□□□□□ -0.33
PRKN-204ENST00000366896 MESP1Q9BRJ9 268 aa13.02□□□□□ -0.33
PRKN-204ENST00000366896 HRH4Q9H3N8 390 aa13.02□□□□□ -0.33
PRKN-204ENST00000366896 SEBOXQ9HB31 216 aaPredicted RBP13.02□□□□□ -0.33
PRKN-204ENST00000366896 TINAGQ9UJW2 476 aa13.02□□□□□ -0.33
PRKN-204ENST00000366896 C13orf42A0A1B0GVH6 325 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 ANKUB1A6NFN9 424 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 C1orf196B1AJZ1 125 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 SFTA3P0C7M3 94 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 AKR1C4P17516 323 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 CYCSP99999 105 aaKnown RBP13.01□□□□□ -0.33
PRKN-204ENST00000366896 SMCO1Q147U7 214 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 SLC22A6Q4U2R8 563 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 ZNF529Q6P280 563 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 H1FNTQ75WM6 255 aaPredicted RBP13.01□□□□□ -0.33
PRKN-204ENST00000366896 TRAPPC6BQ86SZ2 158 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 ADAMTS17Q8TE56 1095 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 VN1R1Q9GZP7 353 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 IGHV3-20A0A0C4DH32 117 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 RNASEK-C17orf49H0YIS7 233 aa13.01□□□□□ -0.33
PRKN-204ENST00000366896 ETV2O00321 342 aaPredicted RBP13.01□□□□□ -0.33
PRKN-204ENST00000366896 APOBEC1P41238 236 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms