RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 PTGES2Q9H7Z7 377 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.32□□□□□ -0.6
VAMP1-201ENST00000361716 KCNIP3Q9Y2W7 256 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 LINC01553A4QN01 128 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 SERINC4A6NH21 518 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 CNOT4O95628 575 aaKnown RBP11.32□□□□□ -0.6
VAMP1-201ENST00000361716 EDN3P14138 238 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 APLNRP35414 380 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 UBE2V2Q15819 145 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 NKAIN1Q4KMZ8 207 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 ZFP62Q8NB50 900 aaPredicted RBP11.32□□□□□ -0.6
VAMP1-201ENST00000361716 REEP6Q96HR9 211 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 BCO1Q9HAY6 547 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 FAM60AQ9NP50 221 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 EHFQ9NZC4 300 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 HEBP2Q9Y5Z4 205 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 B3GALT1Q9Y5Z6 326 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 DBX1A6NMT0 343 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 KLF8O95600 359 aaPredicted RBP11.32□□□□□ -0.6
VAMP1-201ENST00000361716 CST4P01036 141 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 COX5BP10606 129 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 ZNF823P16415 610 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 ACAA2P42765 397 aaKnown RBP11.32□□□□□ -0.6
VAMP1-201ENST00000361716 ADPRHP54922 357 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 HIST2H3PS2Q5TEC6 136 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 C1orf189Q5VU69 101 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 PLXDC2Q6UX71 529 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 OR10AD1Q8NGE0 317 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 TERB2Q8NHR7 220 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 ERGIC1Q969X5 290 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 EGLN1Q9GZT9 426 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 SLCO5A1Q9H2Y9 848 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 C19orf12Q9NSK7 152 aa11.32□□□□□ -0.6
VAMP1-201ENST00000361716 HIST1H2BKO60814 126 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 HIST1H2BJP06899 126 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 CELA2BP08218 269 aaPredicted RBP11.31□□□□□ -0.6
VAMP1-201ENST00000361716 HOXC4P09017 264 aaPredicted RBP11.31□□□□□ -0.6
VAMP1-201ENST00000361716 ERGP11308 486 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 C5AR1P21730 350 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 HIST1H2BOP23527 126 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 HIST1H2BBP33778 126 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 OR1D4P47884 311 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 HIST1H2BDP58876 126 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 PRPS1P60891 318 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 HIST1H2BCP62807 126 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 GGTLC2Q14390 218 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 HIST2H2BEQ16778 126 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 PRICKLE4Q2TBC4 344 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.31□□□□□ -0.6
VAMP1-201ENST00000361716 CPEB2Q7Z5Q1 589 aaKnown RBP11.31□□□□□ -0.6
VAMP1-201ENST00000361716 GKN2Q86XP6 184 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 C16orf52Q8NHV5 167 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 FNDC9Q8TBE3 224 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 SPPL3Q8TCT6 385 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 RNF128Q8TEB7 428 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 Q8WTZ3 238 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 HIST1H2BHQ93079 126 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 C2orf50Q96LR7 162 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 WFIKKN1Q96NZ8 548 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 HIST1H2BNQ99877 126 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 HIST1H2BMQ99879 126 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 TIMM29Q9BSF4 260 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 NMES1Q9C002 83 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 PLA2G2EQ9NZK7 142 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 TMEM14AQ9Y6G1 99 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 BORCS7-ASMTA0A0B4J1R7 106 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 PRAMEF26H0Y7S4 382 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 RAB27BO00194 218 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 SNCAP37840 140 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 ARL4DP49703 201 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 PTCRAQ6ISU1 281 aaPredicted RBP11.31□□□□□ -0.6
VAMP1-201ENST00000361716 NECAP1Q8NC96 275 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 SLC39A7Q92504 469 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 MRGPRFQ96AM1 343 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 RAB39BQ96DA2 213 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 KLHDC3Q9BQ90 382 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 TBL1XR1Q9BZK7 514 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 KIR3DX1Q9H7L2 352 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 CNTD2Q9H8S5 307 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 PARP11Q9NR21 331 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 SIRT7Q9NRC8 400 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 DMDP11532 3685 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 TRBV5-7A0A0A0MS05 114 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 LOC107986453A0A1B0GWG9 222 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 JTBO76095 146 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 NXPH3O95157 252 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 IFNA21P01568 189 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 FHL1Q13642 323 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 CD226Q15762 336 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 COL13A1Q5TAT6 717 aaPredicted RBP11.31□□□□□ -0.6
VAMP1-201ENST00000361716 CHRDL2Q6WN34 429 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 ANGPTL5Q86XS5 388 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 EXD3Q8N9H8 876 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 NTNG2Q96CW9 530 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 SLCO1B1Q9Y6L6 691 aa11.31□□□□□ -0.6
VAMP1-201ENST00000361716 DENND4CQ5VZ89 1909 aa11.3□□□□□ -0.6
VAMP1-201ENST00000361716 DOCK8Q8NF50 2099 aa11.3□□□□□ -0.6
VAMP1-201ENST00000361716 H3BML4 177 aa11.3□□□□□ -0.6
VAMP1-201ENST00000361716 H3BQ15 152 aa11.3□□□□□ -0.6
VAMP1-201ENST00000361716 EREGO14944 169 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms