RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 LRP3O75074 770 aa14.58□□□□□ -0.08
SCAF1-201ENST00000360565 TUSC2O75896 110 aa14.58□□□□□ -0.08
SCAF1-201ENST00000360565 GRPP07492 148 aa14.58□□□□□ -0.08
SCAF1-201ENST00000360565 DSCR4P56555 118 aaPredicted RBP14.58□□□□□ -0.08
SCAF1-201ENST00000360565 LRRTM1Q86UE6 522 aa14.58□□□□□ -0.08
SCAF1-201ENST00000360565 ST7LQ8TDW4 575 aa14.58□□□□□ -0.08
SCAF1-201ENST00000360565 ZNF230Q9UIE0 474 aaPredicted RBP14.58□□□□□ -0.08
SCAF1-201ENST00000360565 ABCA7Q8IZY2 2146 aa14.58□□□□□ -0.08
SCAF1-201ENST00000360565 DCTN6O00399 190 aa14.58□□□□□ -0.08
SCAF1-201ENST00000360565 XRCC2O43543 280 aa14.58□□□□□ -0.08
SCAF1-201ENST00000360565 NME2P1O60361 137 aa14.58□□□□□ -0.08
SCAF1-201ENST00000360565 CLDN1O95832 211 aa14.58□□□□□ -0.08
SCAF1-201ENST00000360565 HIST1H1DP16402 221 aaKnown RBP14.58□□□□□ -0.08
SCAF1-201ENST00000360565 DUSP1P28562 367 aa14.58□□□□□ -0.08
SCAF1-201ENST00000360565 CATR1Q13166 79 aa14.58□□□□□ -0.08
SCAF1-201ENST00000360565 OR2I1PQ8NGU4 316 aa14.58□□□□□ -0.08
SCAF1-201ENST00000360565 UBL7Q96S82 380 aaPredicted RBP14.58□□□□□ -0.08
SCAF1-201ENST00000360565 KLHDC2Q9Y2U9 406 aa14.58□□□□□ -0.08
SCAF1-201ENST00000360565 VHLLQ6RSH7 139 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 FBXL14Q8N1E6 418 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 OIT3Q8WWZ8 545 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 ASB13Q8WXK3 278 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 C20orf24Q9BUV8 137 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 DUSP13Q9UII6 198 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 PCDHGA9Q9Y5G4 932 aaKnown RBP14.57□□□□□ -0.08
SCAF1-201ENST00000360565 DOCK4Q8N1I0 1966 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 CTSBP07858 339 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 NKX6-1P78426 367 aaPredicted RBP14.57□□□□□ -0.08
SCAF1-201ENST00000360565 PDZK1IP1Q13113 114 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 FZD5Q13467 585 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 PNLIPRP3Q17RR3 467 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 WIPI1Q5MNZ9 446 aaPredicted RBP14.57□□□□□ -0.08
SCAF1-201ENST00000360565 TMEM88Q6PEY1 159 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 Q6ZRG5 221 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 CARFQ8N187 725 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 OR2G3Q8NGZ4 309 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 C1QTNF6Q9BXI9 259 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 TWSG1Q9GZX9 223 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 LOXL2Q9Y4K0 774 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 PATJQ8NI35 1801 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 A0A1W2PQD3 144 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 TCRBV16S1A1N1A0A5B0 115 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 TAAR5O14804 337 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 TIMM8AO60220 97 aaPredicted RBP14.57□□□□□ -0.08
SCAF1-201ENST00000360565 THBS4P35443 961 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 TMEM268Q5VZI3 342 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 LHFPL2Q6ZUX7 228 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 ZDHHC22Q8N966 263 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 OR2AE1Q8NHA4 323 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 INTS12Q96CB8 462 aaKnown RBP14.57□□□□□ -0.08
SCAF1-201ENST00000360565 MENTQ9BUN1 341 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 SPACA1Q9HBV2 294 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 DEGS1O15121 323 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 BCKDHBP21953 392 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 AVPI1Q5T686 147 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 C9orf40Q8IXQ3 194 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 SMRP1Q8NCR6 262 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 ASB5Q8WWX0 329 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 FBXW5Q969U6 566 aa14.57□□□□□ -0.08
SCAF1-201ENST00000360565 A0A0G2JMZ2 1700 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 LRRC37A2A6NM11 1700 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 ARHGEF17Q96PE2 2063 aaPredicted RBP14.56□□□□□ -0.08
SCAF1-201ENST00000360565 A0A0U1RQK1 487 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 C7orf66A4D0T2 115 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 ACTL6BO94805 426 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 TBX6O95947 436 aaPredicted RBP14.56□□□□□ -0.08
SCAF1-201ENST00000360565 OR13C7P0DN81 318 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 HLA-DOBP13765 273 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 PTGFRP43088 359 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 HBG1P69891 147 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 HBG2P69892 147 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 ARF1P84077 181 aaKnown RBP14.56□□□□□ -0.08
SCAF1-201ENST00000360565 RAB31Q13636 194 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 PDCD1Q15116 288 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 SP6Q3SY56 376 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 SFT2D1Q8WV19 159 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 FOXB1Q99853 325 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 SMCO4Q9NRQ5 59 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 A0A1W2PPV4 95 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 EFNB2P52799 333 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 LGALSLQ3ZCW2 172 aaPredicted RBP14.56□□□□□ -0.08
SCAF1-201ENST00000360565 TMEM178AQ8NBL3 297 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 OR10Z1Q8NGY1 313 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 DEFB127Q9H1M4 99 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 PLEKHA3Q9HB20 300 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 ICE1Q9Y2F5 2266 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 TTLL8A6PVC2 850 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 HBE1P02100 147 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 SMIM10L1P0DMW3 83 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 GALNSP34059 522 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 HAAOP46952 286 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 OR3A4PP47883 348 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 TLE4Q04727 773 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 D2HGDHQ8N465 521 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 OR10J5Q8NHC4 309 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 SMIM10Q96HG1 83 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 PGLYRP3Q96LB9 341 aa14.56□□□□□ -0.08
SCAF1-201ENST00000360565 OR6C6A6NF89 314 aa14.55□□□□□ -0.08
SCAF1-201ENST00000360565 RNF212BA8MTL3 300 aa14.55□□□□□ -0.08
SCAF1-201ENST00000360565 H3BMH7 237 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms