RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CLLU1OSQ5K130 101 aa7.95□□□□□ -1.14
COL6A6-201ENST00000358511 PAQR9Q6ZVX9 377 aa7.95□□□□□ -1.14
COL6A6-201ENST00000358511 XIRP1Q702N8 1843 aaKnown RBP7.95□□□□□ -1.14
COL6A6-201ENST00000358511 ZNF740Q8NDX6 193 aa7.95□□□□□ -1.14
COL6A6-201ENST00000358511 PIGTQ969N2 578 aa7.95□□□□□ -1.14
COL6A6-201ENST00000358511 SDF2Q99470 211 aa7.95□□□□□ -1.14
COL6A6-201ENST00000358511 PAPPAQ13219 1627 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 NXPH2O95156 264 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 NTSR1P30989 418 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 ACAA1P09110 424 aaPredicted RBP7.94□□□□□ -1.14
COL6A6-201ENST00000358511 COL5A1-AS1Q5SY13 56 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 OR10A7Q8NGE5 316 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 ZNF552Q9H707 407 aaPredicted RBP7.94□□□□□ -1.14
COL6A6-201ENST00000358511 RCL1Q9Y2P8 373 aaKnown RBP7.94□□□□□ -1.14
COL6A6-201ENST00000358511 ELAVL1Q15717 326 aaKnown RBP7.94□□□□□ -1.14
COL6A6-201ENST00000358511 LHFPL2Q6ZUX7 228 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 ARSGQ96EG1 525 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 PCED1AQ9H1Q7 454 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 SFXN1Q9H9B4 322 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 B3GAT1Q9P2W7 334 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 EIF1BO60739 113 aaKnown RBP7.94□□□□□ -1.14
COL6A6-201ENST00000358511 OR5H8P0DN80 308 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 CD99P14209 185 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 PPIAP62937 165 aaKnown RBP7.94□□□□□ -1.14
COL6A6-201ENST00000358511 DSC1Q08554 894 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 CD300LDQ6UXZ3 194 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 GOT1L1Q8NHS2 421 aaPredicted RBP7.94□□□□□ -1.14
COL6A6-201ENST00000358511 APOOQ9BUR5 198 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 PSENENQ9NZ42 101 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 TMED3Q9Y3Q3 217 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 ERVH48-1M5A8F1 160 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 OR7C2O60412 319 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 SLC25A6P12236 298 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 BPIFB3P59826 476 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 SMAD2Q15796 467 aaKnown RBP7.94□□□□□ -1.14
COL6A6-201ENST00000358511 ACKR1Q16570 336 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 STUMQ69YW2 141 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 ABI3BPQ7Z7G0 1075 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 NAT8BQ9UHF3 227 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 LOC102723971A0A1B0GUV8 181 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 FCN1O00602 326 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 CSNK1G2P78368 415 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 GUCA2AQ02747 115 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 RBPJQ06330 500 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 UBE2V2Q15819 145 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 TUSC1Q2TAM9 212 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 ISOC2Q96AB3 205 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 FBXO4Q9UKT5 387 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 LY75O60449 1722 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 FIGNL2A6NMB9 653 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 HCRTR1O43613 425 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 COL9A2Q14055 689 aaPredicted RBP7.94□□□□□ -1.14
COL6A6-201ENST00000358511 LYRM7Q5U5X0 104 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 NTMQ9P121 344 aa7.94□□□□□ -1.14
COL6A6-201ENST00000358511 TRBV11-1A0A0K0K1C0 115 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 DEGS1O15121 323 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 ARG1P05089 322 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 GLI4P10075 376 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 PRTGQ2VWP7 1150 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 OLIG3Q7RTU3 272 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 ELOVL1Q9BW60 279 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 COA3Q9Y2R0 106 aaPredicted RBP7.93□□□□□ -1.14
COL6A6-201ENST00000358511 KIAA1324LA8MWY0 1029 aaPredicted RBP7.93□□□□□ -1.14
COL6A6-201ENST00000358511 OR10J1P30954 320 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 NHLH2Q02577 135 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 CLEC12BQ2HXU8 276 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 PLPP6Q8IY26 295 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 OR52N4Q8NGI2 321 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 BARHL1Q9BZE3 327 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 MAGT1Q9H0U3 335 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 SLC6A13Q9NSD5 602 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 LRIT1Q9P2V4 623 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 PRSS37A4D1T9 235 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 CLEC18AA5D8T8 446 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 MFSD2BA6NFX1 497 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 EDIL3O43854 480 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 SEMA4FO95754 770 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 RPEL1Q2QD12 228 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 ARIH2OSQ8N7S6 290 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 CLEC18CQ8NCF0 446 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 GSX1Q9H4S2 264 aaPredicted RBP7.93□□□□□ -1.14
COL6A6-201ENST00000358511 GPR84Q9NQS5 396 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 A0A1B0GTL3 188 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 ZFAND5O76080 213 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 PGA3P0DJD8 388 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 COL19A1Q14993 1142 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 TMEM97Q5BJF2 176 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 PRSS54Q6PEW0 395 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 SEZ6L2Q6UXD5 910 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 SLAMF6Q96DU3 332 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 C19orf43Q9BQ61 176 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 MANBALQ9NQG1 85 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 C19orf53Q9UNZ5 99 aaPredicted RBP7.93□□□□□ -1.14
COL6A6-201ENST00000358511 GP1BAP07359 652 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 INHBBP09529 407 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 SLC25A4P12235 298 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 ZNF17P17021 662 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 DDTP30046 118 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 PCP4P48539 62 aa7.93□□□□□ -1.14
COL6A6-201ENST00000358511 TP53I13Q8NBR0 393 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms