RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 EML2O95834 649 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 CPN1P15169 458 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 DHRS2Q13268 280 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 CD200R1LQ6Q8B3 271 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 GJC3Q8NFK1 279 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 PRSS27Q9BQR3 290 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 ZNF2Q9BSG1 426 aaPredicted RBP11.03□□□□□ -0.64
COLCA1-201ENST00000355430 GHITMQ9H3K2 345 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 A0A1W2PNR3 127 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 IGHV3-9P01782 118 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 AGFG1P52594 562 aaKnown RBP11.03□□□□□ -0.64
COLCA1-201ENST00000355430 ERVK-16P61578 105 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 RPL23AP62750 156 aaKnown RBP11.03□□□□□ -0.64
COLCA1-201ENST00000355430 CAMK2BQ13554 666 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 ZNF141Q15928 474 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 FBXL14Q8N1E6 418 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 SUMF1Q8NBK3 374 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 SECTM1Q8WVN6 248 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 IL1F10Q8WWZ1 152 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 C10orf90Q96M02 699 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 UBL7Q96S82 380 aaPredicted RBP11.03□□□□□ -0.64
COLCA1-201ENST00000355430 NECAP2Q9NVZ3 263 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 PCDHGA9Q9Y5G4 932 aaKnown RBP11.03□□□□□ -0.64
COLCA1-201ENST00000355430 PIKFYVEQ9Y2I7 2098 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 D2HGDHQ8N465 521 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 M1APQ8TC57 530 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 ANKRD9Q96BM1 317 aaPredicted RBP11.03□□□□□ -0.64
COLCA1-201ENST00000355430 NELFAQ9H3P2 528 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 GPR173Q9NS66 373 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 MYOTQ9UBF9 498 aa11.03□□□□□ -0.64
COLCA1-201ENST00000355430 CD300LBA8K4G0 201 aa11.02□□□□□ -0.64
COLCA1-201ENST00000355430 NUDT19A8MXV4 375 aa11.02□□□□□ -0.64
COLCA1-201ENST00000355430 LRP3O75074 770 aa11.02□□□□□ -0.64
COLCA1-201ENST00000355430 QDPRP09417 244 aa11.02□□□□□ -0.64
COLCA1-201ENST00000355430 LAP3P28838 519 aa11.02□□□□□ -0.64
COLCA1-201ENST00000355430 SLC17A5Q9NRA2 495 aa11.02□□□□□ -0.64
COLCA1-201ENST00000355430 SLC5A6Q9Y289 635 aa11.02□□□□□ -0.64
COLCA1-201ENST00000355430 OR5H15A6NDH6 313 aa11.02□□□□□ -0.64
COLCA1-201ENST00000355430 HMSDA8MTL9 139 aa11.02□□□□□ -0.64
COLCA1-201ENST00000355430 TMIGD3P0DMS9 266 aaPredicted RBP11.02□□□□□ -0.64
COLCA1-201ENST00000355430 GLI4P10075 376 aa11.02□□□□□ -0.64
COLCA1-201ENST00000355430 FCARP24071 287 aa11.02□□□□□ -0.64
COLCA1-201ENST00000355430 RPL19P84098 196 aaKnown RBP11.02□□□□□ -0.64
COLCA1-201ENST00000355430 CBLN3Q6UW01 205 aa11.02□□□□□ -0.64
COLCA1-201ENST00000355430 Q6ZRG5 221 aa11.02□□□□□ -0.64
COLCA1-201ENST00000355430 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.02□□□□□ -0.64
COLCA1-201ENST00000355430 CCDC88CQ9P219 2028 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 ZSWIM8A7E2V4 1837 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 CACNA1CQ13936 2221 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 FCGR2CP31995 323 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 PPP1R1AQ13522 171 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 ZNF528Q3MIS6 628 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 C1orf87Q8N0U7 546 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 BATF2Q8N1L9 274 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 MS4A7Q9GZW8 240 aaPredicted RBP11.02□□□□□ -0.65
COLCA1-201ENST00000355430 HRKO00198 91 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 TK1P04183 234 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 ADRA2AP08913 450 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 PSG6Q00889 435 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 FMODQ06828 376 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 B3GNTL1Q67FW5 361 aaPredicted RBP11.02□□□□□ -0.65
COLCA1-201ENST00000355430 ZPLD1Q8TCW7 415 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 C22orf15Q8WYQ4 148 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 IGF2P01344 180 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 SOHLH1Q5JUK2 328 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 TMEM217Q8N7C4 229 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 OR52H1Q8NGJ2 320 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 H1FXQ92522 213 aaKnown RBP11.02□□□□□ -0.65
COLCA1-201ENST00000355430 CRLF2Q9HC73 371 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 SLC22A11Q9NSA0 550 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 HDGFL3Q9Y3E1 203 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 FLVCR1Q9Y5Y0 555 aa11.02□□□□□ -0.65
COLCA1-201ENST00000355430 SCN3AQ9NY46 2000 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 SCN10AQ9Y5Y9 1956 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 C4orf51C9J302 202 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 MSTNO14793 375 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 IL3RAP26951 378 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 ZNF133P52736 654 aaPredicted RBP11.01□□□□□ -0.65
COLCA1-201ENST00000355430 MPPED2Q15777 294 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 SEZ6L2Q6UXD5 910 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 SLC30A7Q8NEW0 376 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 KPTNQ9Y664 436 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 SBF1O95248 1867 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 CKAP5Q14008 2032 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 TNFSF11O14788 317 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 HLA-DQB1P01920 261 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 ECI1P42126 302 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 CLN3Q13286 438 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 TRILQ7L0X0 811 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 TMEM52Q8NDY8 209 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 MOB1AQ9H8S9 216 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 LANCL2Q9NS86 450 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 TAAR5O14804 337 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 RPL12P30050 165 aaKnown RBP11.01□□□□□ -0.65
COLCA1-201ENST00000355430 CD96P40200 585 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 THEM4Q5T1C6 240 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 C19orf48Q6RUI8 117 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 TMEM182Q6ZP80 229 aaPredicted RBP11.01□□□□□ -0.65
COLCA1-201ENST00000355430 LRRTM1Q86UE6 522 aa11.01□□□□□ -0.65
COLCA1-201ENST00000355430 CDC20BQ86Y33 519 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms