RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 MUC6Q6W4X9 2439 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 MKRN2OSH3BPM6 223 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 CA11O75493 328 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 LPLP06858 475 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 MPZP25189 248 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 PRSS3P35030 304 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 C9orf106Q8NAJ2 232 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 DRAXINQ8NBI3 349 aaPredicted RBP14.93□□□□□ -0.02
VPS13B-201ENST00000355155 TRIB1Q96RU8 372 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 ACTR6Q9GZN1 396 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 NLKQ9UBE8 527 aa14.93□□□□□ -0.02
VPS13B-201ENST00000355155 WDR1O75083 606 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 FAHP16930 419 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 STOMP27105 288 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 ZNF92Q03936 586 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 LHFPL2Q6ZUX7 228 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 TMEM229BQ8NBD8 167 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 SEH1LQ96EE3 360 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 EP300Q09472 2414 aaPredicted RBP14.92□□□□□ -0.02
VPS13B-201ENST00000355155 RBBP9O75884 186 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 CST4P01036 141 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 IGHV1-2P23083 117 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 PTGFRP43088 359 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 RAB1AP62820 205 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 SNTB2Q13425 540 aaKnown RBP14.92□□□□□ -0.02
VPS13B-201ENST00000355155 TBRG1Q3YBR2 411 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 AWAT2Q6E213 333 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 C17orf78Q8N4C9 275 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 FAM169BQ8N8A8 192 aa14.92□□□□□ -0.02
VPS13B-201ENST00000355155 PNLDC1Q8NA58 520 aaKnown RBP14.92□□□□□ -0.02
VPS13B-201ENST00000355155 CACNA1CQ13936 2221 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 TRAV18A0A075B6X5 111 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 GMDSO60547 372 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 CDC14BO60729 498 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 ZNF14P17017 642 aaPredicted RBP14.91□□□□□ -0.02
VPS13B-201ENST00000355155 ACTBP60709 375 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 ACTG1P63261 375 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 GLIPR1L1Q6UWM5 242 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 Q8NFD4 153 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 OBP2BQ9NPH6 170 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 KLK11Q9UBX7 282 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 ZNF816-ZNF321PA0A0X1KG74 233 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 HLA-HP01893 362 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 CD74P04233 296 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 TCRBP04435 133 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 GSTP1P09211 210 aaKnown RBP14.91□□□□□ -0.02
VPS13B-201ENST00000355155 OR3A4PP47883 348 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 TGFBR3Q03167 851 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 GABRA6Q16445 453 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 RNF144BQ7Z419 303 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 GABRG1Q8N1C3 465 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 UBE2J2Q8N2K1 259 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 PHF21AQ96BD5 680 aa14.91□□□□□ -0.02
VPS13B-201ENST00000355155 MED12LQ86YW9 2145 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 LINC00854A0A1B0GVQ3 168 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 HCKP08631 526 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 NAT1P18440 290 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 PLP2Q04941 152 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 PNLIPRP3Q17RR3 467 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 GSG1Q2KHT4 349 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 SEM1Q6ZVN7 128 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 PXT1Q8NFP0 134 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 OR10R2Q8NGX6 335 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 ZNF407Q9C0G0 2248 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 INMT-MINDY4F8WBC2 141 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 TNFSF13O75888 250 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 TIMP3P35625 211 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 RPS27AP62979 156 aaKnown RBP14.9□□□□□ -0.02
VPS13B-201ENST00000355155 TBR1Q16650 682 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 PLEKHN1Q494U1 663 aaPredicted RBP14.9□□□□□ -0.02
VPS13B-201ENST00000355155 AKAP14Q86UN6 197 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 TRAF4Q9BUZ4 470 aaPredicted RBP14.9□□□□□ -0.02
VPS13B-201ENST00000355155 FREM2Q5SZK8 3169 aa14.9□□□□□ -0.02
VPS13B-201ENST00000355155 A0A096LPE4 126 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 A0A1W2PPZ6 126 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 HNRNPCP07910 306 aaKnown RBP eCLIP14.89□□□□□ -0.03
VPS13B-201ENST00000355155 FUT6P51993 359 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 MOGAT2Q3SYC2 334 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 OR6F1Q8NGZ6 308 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 OR2AE1Q8NHA4 323 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 C12orf49Q9H741 205 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 KCNN3Q9UGI6 736 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 A0A0C4DFX4 3053 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 A0A0A6YYD4 124 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 K7EM74 188 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 FAUP35544 74 aaKnown RBP14.89□□□□□ -0.03
VPS13B-201ENST00000355155 UCNP55089 124 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 PPA1Q15181 289 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 TATDN3Q17R31 274 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 RTL6Q6ICC9 239 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 ZSCAN4Q8NAM6 433 aaPredicted RBP14.89□□□□□ -0.03
VPS13B-201ENST00000355155 CSNK2A3Q8NEV1 391 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 OR56B4Q8NH76 319 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 CACNG6Q9BXT2 260 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 CST11Q9H112 138 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 DMXL1Q9Y485 3027 aa14.89□□□□□ -0.03
VPS13B-201ENST00000355155 AKR7A2O43488 359 aa14.88□□□□□ -0.03
VPS13B-201ENST00000355155 TUBG1P23258 451 aa14.88□□□□□ -0.03
VPS13B-201ENST00000355155 RCVRNP35243 200 aa14.88□□□□□ -0.03
VPS13B-201ENST00000355155 GFOD2Q3B7J2 385 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms