RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TRA2AQ13595 282 aaKnown RBP eCLIP8.36□□□□□ -1.07
SMG6-202ENST00000354901 C1orf189Q5VU69 101 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 GGNBP1Q5YKI7 109 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 GALNTL5Q7Z4T8 443 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 ZNF227Q86WZ6 799 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 MAML2Q8IZL2 1156 aaPredicted RBP8.36□□□□□ -1.07
SMG6-202ENST00000354901 PRSS35Q8N3Z0 413 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 APCDD1LQ8NCL9 501 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 METTL21AQ8WXB1 218 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 RAB40AQ8WXH6 277 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 LRFN5Q96NI6 719 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 TAF9BQ9HBM6 251 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 HIF3AQ9Y2N7 669 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 HS3ST3A1Q9Y663 406 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 MTCH2Q9Y6C9 303 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 THADAQ6YHU6 1953 aa8.36□□□□□ -1.07
SMG6-202ENST00000354901 ZNF736B4DX44 427 aaPredicted RBP8.35□□□□□ -1.07
SMG6-202ENST00000354901 XKRYO14609 159 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 FGF16O43320 207 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 TCF21O43680 179 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 ZNF354AO60765 605 aaPredicted RBP8.35□□□□□ -1.07
SMG6-202ENST00000354901 NSA2O95478 260 aaKnown RBP8.35□□□□□ -1.07
SMG6-202ENST00000354901 MYF5P13349 255 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 LTBRP36941 435 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 CD200P41217 278 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 FUT7Q11130 342 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 VWA2Q5GFL6 755 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 C10orf91Q5T1B1 145 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 FAM180AQ6UWF9 173 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 C16orf47Q6ZP98 133 aaPredicted RBP8.35□□□□□ -1.07
SMG6-202ENST00000354901 LANCL3Q6ZV70 420 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 THAP3Q8WTV1 239 aaPredicted RBP8.35□□□□□ -1.07
SMG6-202ENST00000354901 HOXB13Q92826 284 aaPredicted RBP8.35□□□□□ -1.07
SMG6-202ENST00000354901 CCDC74AQ96AQ1 378 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 MIB2Q96AX9 1013 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 PHB2Q99623 299 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 OR11A1Q9GZK7 315 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 METTL8Q9H825 291 aaKnown RBP8.35□□□□□ -1.07
SMG6-202ENST00000354901 PRODH2Q9UF12 536 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 TP53TG5Q9Y2B4 290 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 TMED7Q9Y3B3 224 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 SLC16A7O60669 478 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 CRABP1P29762 137 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 ZNF345Q14585 488 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 WDR38Q5JTN6 314 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 NCR3LG1Q68D85 454 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 KIAA0895LQ68EN5 471 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 ZNF705AQ6ZN79 300 aaPredicted RBP8.35□□□□□ -1.07
SMG6-202ENST00000354901 OR10J5Q8NHC4 309 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 PTPMT1Q8WUK0 201 aaPredicted RBP8.35□□□□□ -1.07
SMG6-202ENST00000354901 ASB17Q8WXJ9 295 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 WFIKKN1Q96NZ8 548 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 OR5AC2Q9NZP5 309 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 TGIF2-C20orf24A0A0A6YYL0 155 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 OR4C45A6NMZ5 311 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 SRPX2O60687 465 aaPredicted RBP8.35□□□□□ -1.07
SMG6-202ENST00000354901 PNMTP11086 282 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 TUBG1P23258 451 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 IL12BP29460 328 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 IL2RGP31785 369 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 ZNF117Q03924 483 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 ARHGEF39Q8N4T4 335 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 ADAD2Q8NCV1 583 aaKnown RBP8.35□□□□□ -1.07
SMG6-202ENST00000354901 NELFAQ9H3P2 528 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 SLC2A4RGQ9NR83 387 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 MMP17Q9ULZ9 603 aa8.35□□□□□ -1.07
SMG6-202ENST00000354901 MAP1BP46821 2468 aaKnown RBP8.34□□□□□ -1.07
SMG6-202ENST00000354901 A0A1W2PPC1 479 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 DCDC2BA2VCK2 349 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 SEC14L6B5MCN3 397 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 TMEM150CB9EJG8 249 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 MFNGO00587 321 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 RAMP1O60894 148 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 MPZL1O95297 269 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 ITGA5P08648 1049 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 ALOX5APP20292 161 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 CD96P40200 585 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 DVL1P1P54792 670 aaPredicted RBP8.34□□□□□ -1.07
SMG6-202ENST00000354901 SLC37A1P57057 533 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 GUK1Q16774 197 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 CLEC12BQ2HXU8 276 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 SLC22A6Q4U2R8 563 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 ZNF684Q5T5D7 378 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 HLA-DQA1Q5Y7H0 255 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 ELOVL1Q9BW60 279 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 TBL1XR1Q9BZK7 514 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 TAS2R8Q9NYW2 309 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 HSF4Q9ULV5 492 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 RCL1Q9Y2P8 373 aaKnown RBP8.34□□□□□ -1.07
SMG6-202ENST00000354901 WIF1Q9Y5W5 379 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 IGHV3-20A0A0C4DH32 117 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 EIF1AYO14602 144 aaKnown RBP8.34□□□□□ -1.07
SMG6-202ENST00000354901 XRCC3O43542 346 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 WNT11O96014 354 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 ERCC1P07992 297 aaPredicted RBP8.34□□□□□ -1.07
SMG6-202ENST00000354901 ASAH2BP0C7U1 165 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 TAGLN2P37802 199 aaKnown RBP8.34□□□□□ -1.07
SMG6-202ENST00000354901 CAPZBP47756 277 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 CAMLGP49069 296 aa8.34□□□□□ -1.07
SMG6-202ENST00000354901 ARL4DP49703 201 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms