RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 ERRFI1Q9UJM3 462 aaPredicted RBP13.44□□□□□ -0.26
CTSA-202ENST00000354880 SPATA2Q9UM82 520 aa13.44□□□□□ -0.26
CTSA-202ENST00000354880 HIVEP3Q5T1R4 2406 aa13.44□□□□□ -0.26
CTSA-202ENST00000354880 GGT3PA6NGU5 568 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 GMDSO60547 372 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 ALDOBP05062 364 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 HCKP08631 526 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 CALCBP10092 127 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 HTR2CP28335 458 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 CALCRP30988 508 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 ETV6P41212 452 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 RAD52P43351 418 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 NAAAQ02083 359 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 ZNF846Q147U1 533 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 RAB11BQ15907 218 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 FBXL19-AS1Q494R0 122 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 SPATA46Q5T0L3 261 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 TMEM42Q69YG0 159 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 FAM166AQ6J272 317 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 OR6M1Q8NGM8 313 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 OR1J1Q8NGS3 322 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 OR5H6Q8NGV6 325 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 LILRB4Q8NHJ6 448 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 LGALS14Q8TCE9 139 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 DIRAS2Q96HU8 199 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 SORCS2Q96PQ0 1159 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 NKX3-1Q99801 234 aaPredicted RBP13.43□□□□□ -0.26
CTSA-202ENST00000354880 UQCC2Q9BRT2 126 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 OR2J1Q9GZK6 312 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 METTL17Q9H7H0 456 aaPredicted RBP13.43□□□□□ -0.26
CTSA-202ENST00000354880 GPR173Q9NS66 373 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 ADAM30Q9UKF2 790 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 FAM90A27PA6NNH2 459 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 NRASP01111 189 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 GNLYP22749 145 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 ZNF93P35789 620 aaPredicted RBP13.43□□□□□ -0.26
CTSA-202ENST00000354880 ZNF45Q02386 682 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 IGFBP7Q16270 282 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 DMRTC1Q5HYR2 192 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 C1orf100Q5SVJ3 147 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 MTFR2Q6P444 385 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 SEZ6L2Q6UXD5 910 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 FBXW12Q6X9E4 464 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 CDH26Q8IXH8 852 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 FTMTQ8N4E7 242 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 CSNK2A3Q8NEV1 391 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 SPACA5Q96QH8 159 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 BCL2L14Q9BZR8 327 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 OR5V1Q9UGF6 321 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 KCNN3Q9UGI6 736 aa13.43□□□□□ -0.26
CTSA-202ENST00000354880 CD300LBA8K4G0 201 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 CRYAAP02489 173 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 PRF1P14222 555 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 PPP3CBP16298 524 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 AZGP1P25311 298 aaKnown RBP13.42□□□□□ -0.26
CTSA-202ENST00000354880 UQCRFS1P47985 274 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 SCAND1P57086 179 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 ERVS71-1P61550 626 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 P2RY14Q15391 338 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 CNN3Q15417 329 aaKnown RBP13.42□□□□□ -0.26
CTSA-202ENST00000354880 LRRC28Q86X40 367 aaPredicted RBP13.42□□□□□ -0.26
CTSA-202ENST00000354880 SLC25A40Q8TBP6 338 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 UBASH3BQ8TF42 649 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 SSC4DQ8WTU2 575 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 NPRL2Q8WTW4 380 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 CA5BP1Q8WTZ4 195 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 ZFAND2BQ8WV99 257 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 PIGCQ92535 297 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 SPSB1Q96BD6 273 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 CNTD2Q9H8S5 307 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 RHBDD3Q9Y3P4 386 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 CADP27708 2225 aa13.42□□□□□ -0.26
CTSA-202ENST00000354880 FAM25AB3EWG3 89 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 FAM25CB3EWG5 89 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 FAM25GB3EWG6 89 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 ELK1P19419 428 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 TUBG1P23258 451 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 C4orf17Q53FE4 359 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 KRT74Q7RTS7 529 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 C1orf174Q8IYL3 243 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 OR51D1Q8NGF3 324 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 OR4D6Q8NGJ1 314 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 SLC25A28Q96A46 364 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 FAM3DQ96BQ1 224 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 CMBLQ96DG6 245 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 TECTBQ96PL2 329 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 NEK6Q9HC98 313 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 TUBG2Q9NRH3 451 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 ETV7Q9Y603 341 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 NKX2-6A6NCS4 301 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 J3QRK9 145 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 APOA1P02647 267 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 EIF4EP06730 217 aaKnown RBP13.41□□□□□ -0.26
CTSA-202ENST00000354880 RAC2P15153 192 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 ARSBP15848 533 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 POU3F4P49335 361 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 EVX1P49640 407 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 KISS1Q15726 138 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 OR2T2Q6IF00 324 aa13.41□□□□□ -0.26
CTSA-202ENST00000354880 CNIH2Q6PI25 160 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms