RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 ALKBH4Q9NXW9 302 aa10.1□□□□□ -0.79
CAPN9-202ENST00000354537 C14orf166Q9Y224 244 aaKnown RBP10.1□□□□□ -0.79
CAPN9-202ENST00000354537 IGKV1D-43A0A0B4J1Z2 117 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 SERPINE3A8MV23 424 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 H3BMH7 237 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 K7EPK0 472 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 RAD51DO75771 328 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 S100A6P06703 90 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 SEC11BP0C7V7 166 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 PRF1P14222 555 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 BCKDHBP21953 392 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 TLE3Q04726 772 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 HGFACQ04756 655 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 C1orf61Q13536 156 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 KCNMB1Q16558 191 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 C9orf50Q5SZB4 431 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 TMEM92Q6UXU6 159 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 FAM71E2Q8N5Q1 922 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 OR9K2Q8NGE7 335 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 OR51F2Q8NH61 342 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 OR51E1Q8TCB6 317 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 C14orf79Q96F83 325 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 NRSN2Q9GZP1 204 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 RPH3AQ9Y2J0 694 aaPredicted RBP10.09□□□□□ -0.79
CAPN9-202ENST00000354537 PMS2P1A4D2B8 440 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 DEDDO75618 318 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 SERPINA5P05154 406 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 FABP1P07148 127 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 GABRG2P18507 467 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 NME2P22392 152 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 MAS1LP35410 378 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 RBMXP38159 391 aaKnown RBP10.09□□□□□ -0.79
CAPN9-202ENST00000354537 GLP1RP43220 463 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 RAB5CP51148 216 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 POU3F1Q03052 451 aaPredicted RBP10.09□□□□□ -0.79
CAPN9-202ENST00000354537 TFF2Q03403 129 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 C17orf67Q0P5P2 114 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 ARFRP1Q13795 201 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 RBM39Q14498 530 aaKnown RBP10.09□□□□□ -0.79
CAPN9-202ENST00000354537 Q6ZRG5 221 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 ZFP82Q8N141 532 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 CARFQ8N187 725 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 BHLHE23Q8NDY6 225 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 SLC25A43Q8WUT9 341 aaPredicted RBP10.09□□□□□ -0.79
CAPN9-202ENST00000354537 CPNE2Q96FN4 548 aaPredicted RBP10.09□□□□□ -0.79
CAPN9-202ENST00000354537 ARHGAP5-AS1Q96IT6 56 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 PRRX2Q99811 253 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 LRRC61Q9BV99 259 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 DECR2Q9NUI1 292 aa10.09□□□□□ -0.79
CAPN9-202ENST00000354537 DOCK8Q8NF50 2099 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 SPTBP11277 2137 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 IGHV5-51A0A0C4DH38 117 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 A0A1B0GW64 132 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 CDC14CA4D256 554 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 C17orf51A8MQB3 221 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 SGCEO43556 437 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 ZNF354AO60765 605 aaPredicted RBP10.08□□□□□ -0.8
CAPN9-202ENST00000354537 IFNA21P01568 189 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 CTSDP07339 412 aaPredicted RBP10.08□□□□□ -0.8
CAPN9-202ENST00000354537 CA3P07451 260 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 ZNF44P15621 663 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 IL11P20809 199 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 S100PP25815 95 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 FCGR2CP31995 323 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 SNU13P55769 128 aaKnown RBP10.08□□□□□ -0.8
CAPN9-202ENST00000354537 CSNK2A1P68400 391 aaPredicted RBP10.08□□□□□ -0.8
CAPN9-202ENST00000354537 PNLDC1Q8NA58 520 aaKnown RBP10.08□□□□□ -0.8
CAPN9-202ENST00000354537 CCDC54Q8NEL0 328 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 CSNK2A3Q8NEV1 391 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 OR2AJ1Q8NGZ0 328 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 NANPQ8TBE9 248 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 CLCC1Q96S66 551 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 TM2D1Q9BX74 207 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 OR51M1Q9H341 326 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 SMDT1Q9H4I9 107 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 ZNF304Q9HCX3 659 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 TCRBV21S2A2A0A5A6 115 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 LIPT2A6NK58 231 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 C9JQL5 133 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 NAT2P11245 290 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 GLRA1P23415 457 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 CTSSP25774 331 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 THBS4P35443 961 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 SNCAP37840 140 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 OR3A4PP47883 348 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 STARD6P59095 220 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 S100A10P60903 97 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 RAB1AP62820 205 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 RHEBQ15382 184 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 TTLL10Q6ZVT0 673 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 C17orf82Q86X59 251 aaPredicted RBP10.08□□□□□ -0.8
CAPN9-202ENST00000354537 FNDC9Q8TBE3 224 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 KLHDC7BQ96G42 594 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 ZDHHC12Q96GR4 267 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 LMAN1LQ9HAT1 526 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 PLA2G2EQ9NZK7 142 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 GSKIPQ9P0R6 139 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 FBXL17Q9UF56 701 aa10.08□□□□□ -0.8
CAPN9-202ENST00000354537 STRAPQ9Y3F4 350 aaKnown RBP10.08□□□□□ -0.8
CAPN9-202ENST00000354537 CRTAPO75718 401 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms