RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 H0YGG7 62 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 ATXN7O15265 892 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF25P17030 456 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-201ENST00000352993 OMGP23515 440 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 ADPRHP54922 357 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 ARF3P61204 181 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-201ENST00000352993 UNC119Q13432 240 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 SP6Q3SY56 376 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 C1QL3Q5VWW1 255 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 KLHL24Q6TFL4 600 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 GLIPR1L1Q6UWM5 242 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 ANKRD33Q7Z3H0 272 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF429Q86V71 674 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 C1QL4Q86Z23 238 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 SGPP2Q8IWX5 399 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 HIST3H2BBQ8N257 126 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 C17orf78Q8N4C9 275 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 SLC22A24Q8N4F4 322 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 NKAIN3Q8N8D7 197 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 ZFP62Q8NB50 900 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-201ENST00000352993 TOMM40LQ969M1 308 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 MUCL1Q96DR8 90 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 GALNT14Q96FL9 552 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 WDR92Q96MX6 357 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 GNRHR2Q96P88 292 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 NIPSNAP3BQ9BS92 247 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 UCK1Q9HA47 277 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 DEC1Q9P2X7 70 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 B3GALT5Q9Y2C3 310 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 COA3Q9Y2R0 106 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-201ENST00000352993 COL4A6Q14031 1691 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 SLC33A1O00400 549 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-201ENST00000352993 FGF7P21781 194 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 CST5P28325 142 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-201ENST00000352993 IL2RGP31785 369 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF93P35789 620 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-201ENST00000352993 PCP4P48539 62 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 RAB4BP61018 213 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 RPS4XP62701 263 aaKnown RBP6.79□□□□□ -1.32
BRCA1-201ENST00000352993 SUPT4H1P63272 117 aaKnown RBP6.79□□□□□ -1.32
BRCA1-201ENST00000352993 C1orf189Q5VU69 101 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 MED25Q71SY5 747 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 DCXRQ7Z4W1 244 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 SULF2Q8IWU5 870 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 SLC39A11Q8N1S5 342 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 OR5D18Q8NGL1 313 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 HS3ST3B1Q9Y662 390 aa6.79□□□□□ -1.32
BRCA1-201ENST00000352993 LOC101059948A0A1B0GTJ6 334 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 A0A1W2PP11 408 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 SCDO00767 359 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 DANCRP0C864 163 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 CTLA4P16410 223 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 TBPP20226 339 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 FPR2P25090 351 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 SNU13P55769 128 aaKnown RBP6.78□□□□□ -1.32
BRCA1-201ENST00000352993 ACKR1Q16570 336 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 DEFB110Q30KQ9 67 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 TMEM52BQ4KMG9 183 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 CATSPERDQ86XM0 798 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 PLPP5Q8NEB5 264 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 NPRL2Q8WTW4 380 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 HPSE2Q8WWQ2 592 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 TAAR8Q969N4 342 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 CYYR1Q96J86 154 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 ADAM19Q9H013 955 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 POLR1DQ9Y2S0 133 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 CBY1Q9Y3M2 126 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 B3GALT1Q9Y5Z6 326 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 ELOA3CA0A087WX78 387 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-201ENST00000352993 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 ZNF724A8MTY0 619 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 TNFSF12O43508 249 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 GAPDHP04406 335 aaKnown RBP6.78□□□□□ -1.32
BRCA1-201ENST00000352993 PGA4P0DJD7 388 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 PGA5P0DJD9 388 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 COX5BP10606 129 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 ERVFRD-1P60508 538 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 ELOBQ15370 118 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 CHRDL2Q6WN34 429 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 Q7L0L9 218 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 PRR22Q8IZ63 422 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 OR9A4Q8NGU2 314 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 FRZBQ92765 325 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 MRPL24Q96A35 216 aaKnown RBP6.78□□□□□ -1.32
BRCA1-201ENST00000352993 ARHGAP5-AS1Q96IT6 56 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 FAM210BQ96KR6 192 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 GPX7Q96SL4 187 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-201ENST00000352993 C2orf88Q9BSF0 95 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 LMF2Q9BU23 707 aaKnown RBP6.78□□□□□ -1.32
BRCA1-201ENST00000352993 MRPS28Q9Y2Q9 187 aaKnown RBP6.78□□□□□ -1.32
BRCA1-201ENST00000352993 RHBDD3Q9Y3P4 386 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 LIPGQ9Y5X9 500 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 CCDC163A0A0D9SF12 145 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 RBFOX3A6NFN3 312 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 CLDN4O14493 209 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 HCRTR2O43614 444 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 MMP7P09237 267 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-201ENST00000352993 PPM1AP35813 382 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 ALDH3B1P43353 468 aa6.78□□□□□ -1.32
BRCA1-201ENST00000352993 GABRA4P48169 554 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms