RNA–Protein interactions for RNA: ENST00000351842.8

USP4-202, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 1 (best) BASIC

Gene USP4, Length 3,222 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-202ENST00000351842 TAS2R4Q9NYW5 299 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 CGGBP1Q9UFW8 167 aaPredicted RBP7.94□□□□□ -1.14
USP4-202ENST00000351842 ST6GALNAC2Q9UJ37 374 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 SSR3Q9UNL2 185 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 ISPDA4D126 451 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 OR4C45A6NMZ5 311 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 CDC14BO60729 498 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 B3GALNT1O75752 331 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 CDRT1O95170 752 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 HCKP08631 526 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 BMP4P12644 408 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 FOSL1P15407 271 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 CBR1P16152 277 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 GCH1P30793 250 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 MLLT11Q13015 90 aaPredicted RBP7.94□□□□□ -1.14
USP4-202ENST00000351842 SIGIRRQ6IA17 410 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 RPL22L1Q6P5R6 122 aaKnown RBP7.94□□□□□ -1.14
USP4-202ENST00000351842 ZNF808Q8N4W9 903 aaPredicted RBP7.94□□□□□ -1.14
USP4-202ENST00000351842 SUN5Q8TC36 379 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 ADAT3Q96EY9 351 aaPredicted RBP7.94□□□□□ -1.14
USP4-202ENST00000351842 G6PC2Q9NQR9 355 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 INPP5EQ9NRR6 644 aa7.94□□□□□ -1.14
USP4-202ENST00000351842 PRRC2AP48634 2157 aaKnown RBP7.94□□□□□ -1.14
USP4-202ENST00000351842 A6NLC8 198 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 ZNF850A8MQ14 1090 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 GRPP07492 148 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 SDC2P34741 201 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 ZNF544Q6NX49 715 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 MTFR2Q6P444 385 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 SSC4DQ8WTU2 575 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 FAM46BQ96A09 425 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 SP140LQ9H930 580 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 HHLA2Q9UM44 414 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 LAMP3Q9UQV4 416 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 ZNF281Q9Y2X9 895 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 TRAV8-7A0A075B6U6 113 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 RGS5O15539 181 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 SLC2A2P11168 524 aaPredicted RBP7.93□□□□□ -1.14
USP4-202ENST00000351842 ROM1Q03395 351 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 NDUFA5Q16718 116 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 TEX30Q5JUR7 227 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 CATSPERDQ86XM0 798 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 SYS1Q8N2H4 156 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 IL17RDQ8NFM7 739 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 GPR148Q8TDV2 347 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 LYZL4Q96KX0 146 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 MMP27Q9H306 513 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 NEK6Q9HC98 313 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 ELOVL5Q9NYP7 299 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 CCDC59Q9P031 241 aaKnown RBP7.93□□□□□ -1.14
USP4-202ENST00000351842 GPR160Q9UJ42 338 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 RHBDD3Q9Y3P4 386 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 SIAH2O43255 324 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 SMPD2O60906 423 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 CD3EP07766 207 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 CRYGSP22914 178 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 THBS4P35443 961 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 PPP5CP53041 499 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 CCL8P80075 99 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 KCNMB1Q16558 191 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 PCK2Q16822 640 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 MSMPQ1L6U9 139 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 ZNF684Q5T5D7 378 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 HES5Q5TA89 166 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 PLCXD3Q63HM9 321 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 RGS7BPQ6MZT1 257 aaPredicted RBP7.93□□□□□ -1.14
USP4-202ENST00000351842 DRAM2Q6UX65 266 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 MOB3CQ70IA8 216 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 ANGPTL5Q86XS5 388 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 KLF14Q8TD94 323 aaPredicted RBP7.93□□□□□ -1.14
USP4-202ENST00000351842 PGLYRP3Q96LB9 341 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 ESRP2Q9H6T0 727 aaKnown RBP7.93□□□□□ -1.14
USP4-202ENST00000351842 TCF7L1Q9HCS4 588 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 CA10Q9NS85 328 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 CISD1Q9NZ45 108 aaKnown RBP7.93□□□□□ -1.14
USP4-202ENST00000351842 AMDHD2Q9Y303 409 aa7.93□□□□□ -1.14
USP4-202ENST00000351842 hCG_1807616A0A1W2PRN6 198 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 CNOT4O95628 575 aaKnown RBP7.92□□□□□ -1.14
USP4-202ENST00000351842 IGKV3-15P01624 115 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 CD2P06729 351 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 S100A5P33763 92 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 ZNF133P52736 654 aaPredicted RBP7.92□□□□□ -1.14
USP4-202ENST00000351842 ZMAT1Q5H9K5 638 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 RNLSQ5VYX0 342 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 DMKNQ6E0U4 476 aaPredicted RBP7.92□□□□□ -1.14
USP4-202ENST00000351842 ZNF485Q8NCK3 441 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 OR2Z1Q8NG97 314 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 OR1J2Q8NGS2 313 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 OR8S1Q8NH09 359 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 APOBEC3DQ96AK3 386 aaPredicted RBP7.92□□□□□ -1.14
USP4-202ENST00000351842 TXNL4BQ9NX01 149 aaKnown RBP7.92□□□□□ -1.14
USP4-202ENST00000351842 TEX15Q9BXT5 2789 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 TEP1Q99973 2627 aaKnown RBP7.92□□□□□ -1.14
USP4-202ENST00000351842 A0A075B6Q4 140 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 PLSCR5A0PG75 271 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 SHISA3A0PJX4 238 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 H0YL77 283 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 ANGPTL7O43827 346 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 ZNF254O75437 659 aa7.92□□□□□ -1.14
USP4-202ENST00000351842 OR4A8P0C604 315 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms