RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 TMEM33P57088 247 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 ERVFRD-1P60508 538 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 HERPUD1Q15011 391 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 TMEM176BQ3YBM2 270 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF260Q3ZCT1 412 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 CHRFAM7AQ494W8 412 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF658BQ4V348 819 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-201ENST00000343524 GPR157Q5UAW9 335 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF774Q6NX45 483 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 ULK3Q6PHR2 472 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 CLEC18BQ6UXF7 455 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 RFLNAQ6ZTI6 216 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF429Q86V71 674 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 NRSN1Q8IZ57 195 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 SEMA6DQ8NFY4 1073 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 OR2L2Q8NH16 312 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 MARCH1Q8TCQ1 289 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 RBMXL1Q96E39 390 aaKnown RBP7.25□□□□□ -1.25
ATG4A-201ENST00000343524 URM1Q9BTM9 101 aaKnown RBP7.25□□□□□ -1.25
ATG4A-201ENST00000343524 WDR76Q9H967 626 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 CDH20Q9HBT6 801 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 TAC3Q9UHF0 121 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 GPR132Q9UNW8 380 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 NSG2Q9Y328 171 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 YIPF1Q9Y548 306 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 HS3ST3B1Q9Y662 390 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 MYO10Q9HD67 2058 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 DENND4CQ5VZ89 1909 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 LEFTY2O00292 366 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 GPR137BO60478 399 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 RAMP1O60894 148 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 LILRB3O75022 631 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 IL18BPO95998 194 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 CYB5R3P00387 301 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-201ENST00000343524 HBE1P02100 147 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 PNLIPP16233 465 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 HIST1H1TP22492 207 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-201ENST00000343524 CST5P28325 142 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-201ENST00000343524 SPOCK1Q08629 439 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 ARSJQ5FYB0 599 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-201ENST00000343524 LINC01590Q5TEZ4 76 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 FCRL6Q6DN72 434 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 TMEM225Q6GV28 225 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 POMZP3Q6PJE2 187 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 GDPD4Q6W3E5 623 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 SSX7Q7RTT5 188 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 SLC26A10Q8NG04 563 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 OR4S1Q8NGB4 309 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 OR51A2Q8NGJ7 313 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 OR13C9Q8NGT0 318 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 FNDC9Q8TBE3 224 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 IFI44Q8TCB0 444 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 ABHD5Q8WTS1 349 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 SCAMP4Q969E2 229 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 LINC00615Q96LM1 132 aaPredicted RBP7.25□□□□□ -1.25
ATG4A-201ENST00000343524 LMF1Q96S06 567 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 NMNAT3Q96T66 252 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 SYT3Q9BQG1 590 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 OR51B6Q9H340 312 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 SRD5A3Q9H8P0 318 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 USP36Q9P275 1121 aaKnown RBP7.25□□□□□ -1.25
ATG4A-201ENST00000343524 IL17BQ9UHF5 180 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 SLC25A13Q9UJS0 675 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 TUBD1Q9UJT1 453 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 LSM7Q9UK45 103 aaKnown RBP7.25□□□□□ -1.25
ATG4A-201ENST00000343524 HS3ST2Q9Y278 367 aa7.25□□□□□ -1.25
ATG4A-201ENST00000343524 CHTOPQ9Y3Y2 248 aaKnown RBP7.25□□□□□ -1.25
ATG4A-201ENST00000343524 FAM230AA0A1W2PPH8 454 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 A6NIZ1 184 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 HSD17B6O14756 317 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF264O43296 627 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 TSPAN2O60636 221 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 GUSBP08236 651 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 SLC35G4P0C7Q5 338 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 AKR1A1P14550 325 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF708P17019 499 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 CD82P27701 267 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 OR10J1P30954 320 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 RBMXP38159 391 aaKnown RBP7.24□□□□□ -1.25
ATG4A-201ENST00000343524 PDLIM4P50479 330 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 NOVA1P51513 510 aaKnown RBP7.24□□□□□ -1.25
ATG4A-201ENST00000343524 HLA-DRB3P79483 266 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 MFGE8Q08431 387 aaPredicted RBP7.24□□□□□ -1.25
ATG4A-201ENST00000343524 SLC9A3R2Q15599 337 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 TAF9Q16594 264 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 TMEM241Q24JQ0 296 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 ACOT6Q3I5F7 207 aaPredicted RBP7.24□□□□□ -1.25
ATG4A-201ENST00000343524 ALG10BQ5I7T1 473 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 EMC4Q5J8M3 183 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 C1orf100Q5SVJ3 147 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 COL5A1-AS1Q5SY13 56 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 GLYATL3Q5SZD4 288 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 FBXW9Q5XUX1 488 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 ZNF343Q6P1L6 599 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 HSD11B1LQ7Z5J1 315 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 TGIF2LYQ8IUE0 185 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 FAM219AQ8IW50 185 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 SGPP2Q8IWX5 399 aa7.24□□□□□ -1.25
ATG4A-201ENST00000343524 LRRC25Q8N386 305 aaPredicted RBP7.24□□□□□ -1.25
ATG4A-201ENST00000343524 LILRA3Q8N6C8 439 aaPredicted RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms