RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 TMEM88Q6PEY1 159 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 EFSO43281 561 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 TPPPO94811 219 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 HBE1P02100 147 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 HMGN3Q15651 99 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 TMEM268Q5VZI3 342 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 OR2G3Q8NGZ4 309 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 SFT2D1Q8WV19 159 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 SDSLQ96GA7 329 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 PGLYRP3Q96LB9 341 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 PLEKHA2Q9HB19 425 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 ROS1P08922 2347 aa6.42□□□□□ -1.38
VCAN-202ENST00000342785 PLSCR5A0PG75 271 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 TTLL8A6PVC2 850 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 HMSDA8MTL9 139 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 EFNB2P52799 333 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 ANKRD37Q7Z713 158 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 OR10Z1Q8NGY1 313 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 TCEAL3Q969E4 200 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 PCDHB10Q9UN67 800 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 IGHV3-64DA0A0J9YX35 117 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 GP1BAP07359 652 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 DUSP1P28562 367 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 THBS4P35443 961 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 MMP16P51512 607 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 PIGPP57054 158 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 HBG1P69891 147 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 HBG2P69892 147 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 NKX6-1P78426 367 aaPredicted RBP6.41□□□□□ -1.38
VCAN-202ENST00000342785 INSM1Q01101 510 aaPredicted RBP6.41□□□□□ -1.38
VCAN-202ENST00000342785 RAB31Q13636 194 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 C6orf15Q6UXA7 325 aaPredicted RBP6.41□□□□□ -1.38
VCAN-202ENST00000342785 HAS2Q92819 552 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 MENTQ9BUN1 341 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 C1QTNF6Q9BXI9 259 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 C12orf49Q9H741 205 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 KLHDC2Q9Y2U9 406 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 NME2P1O60361 137 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 WDR1O75083 606 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 CLDN1O95832 211 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 SMIM10L1P0DMW3 83 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 GALNSP34059 522 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 LTC4SQ16873 150 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 OR5M8Q8NGP6 311 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 NUBPLQ8TB37 319 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 GPX8Q8TED1 209 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 ASB5Q8WWX0 329 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 HGDQ93099 445 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 SMIM10Q96HG1 83 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 REEP6Q96HR9 211 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 FOXB1Q99853 325 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 CRLF2Q9HC73 371 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 LANCL2Q9NS86 450 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 PURGQ9UJV8 347 aaKnown RBP6.41□□□□□ -1.38
VCAN-202ENST00000342785 TTC28Q96AY4 2481 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 PLXNB2O15031 1838 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 ARID2Q68CP9 1835 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 A0A1W2PPV4 95 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 NUDT19A8MXV4 375 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 SPRY1O43609 319 aaPredicted RBP6.41□□□□□ -1.38
VCAN-202ENST00000342785 MPC2O95563 127 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 BGLAPP02818 100 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 CD37P11049 281 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 PTGFRP43088 359 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 TLE4Q04727 773 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 SP6Q3SY56 376 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 LYPD8Q6UX82 237 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 OR2W3Q7Z3T1 314 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 MCHR2Q969V1 340 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 C14orf79Q96F83 325 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 FER1L6-AS2Q96M78 137 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 ZMIZ1Q9ULJ6 1067 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 TMEM229AB2RXF0 380 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 CTXN2P0C2S0 81 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 H2AFB1P0C5Y9 115 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 OR13C7P0DN81 318 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 RRASP10301 218 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 FOXL2P58012 376 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 D2HGDHQ8N465 521 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 CTHRC1Q96CG8 243 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 NIPSNAP3BQ9BS92 247 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 C20orf24Q9BUV8 137 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 E5RGE8 158 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 PIN1P1O15428 100 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 HPNP05981 417 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 HLA-DOBP13765 273 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 CBR1P16152 277 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 OR2AE1Q8NHA4 323 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 SPSB1Q96BD6 273 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 DUSP13Q9UII6 198 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 NSG2Q9Y328 171 aa6.41□□□□□ -1.38
VCAN-202ENST00000342785 OR6C65A6NJZ3 312 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 HS3ST1O14792 307 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 ACTL6BO94805 426 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 NXPH3O95157 252 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 ANKRD34CP0C6C1 535 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 DSCR4P56555 118 aaPredicted RBP6.4□□□□□ -1.38
VCAN-202ENST00000342785 WIPI1Q5MNZ9 446 aaPredicted RBP6.4□□□□□ -1.38
VCAN-202ENST00000342785 DRAM2Q6UX65 266 aa6.4□□□□□ -1.38
VCAN-202ENST00000342785 C9orf40Q8IXQ3 194 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms