RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ACTBL2Q562R1 376 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 C10orf91Q5T1B1 145 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 LINC00696Q6ZRV3 163 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 PSMF1Q92530 271 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 SLC25A36Q96CQ1 311 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 AKR1E2Q96JD6 320 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 C2orf88Q9BSF0 95 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 GAR1Q9NY12 217 aaKnown RBP13.38□□□□□ -0.27
BRAT1-201ENST00000340611 PLA2G3Q9NZ20 509 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 RCC2Q9P258 522 aaKnown RBP13.38□□□□□ -0.27
BRAT1-201ENST00000340611 ZZEF1O43149 2961 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 A0A1W2PQD3 144 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 RPP14O95059 124 aaKnown RBP13.38□□□□□ -0.27
BRAT1-201ENST00000340611 CD96P40200 585 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 SSR4P51571 173 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 TAS2R20P59543 309 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 NUTF2P61970 127 aaKnown RBP13.38□□□□□ -0.27
BRAT1-201ENST00000340611 KIAA0141Q14154 515 aaPredicted RBP13.38□□□□□ -0.27
BRAT1-201ENST00000340611 OLFML2AQ68BL7 652 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 OR6K6Q8NGW6 343 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 ST7LQ8TDW4 575 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 CNN2Q99439 309 aaKnown RBP13.38□□□□□ -0.27
BRAT1-201ENST00000340611 ZNF337Q9Y3M9 751 aa13.38□□□□□ -0.27
BRAT1-201ENST00000340611 A0A0D9SG52 128 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 MARCH11A6NNE9 402 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 H3BML4 177 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 CYTIPO60759 359 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 HIST1H1BP16401 226 aaKnown RBP13.37□□□□□ -0.27
BRAT1-201ENST00000340611 CSRP1P21291 193 aaKnown RBP13.37□□□□□ -0.27
BRAT1-201ENST00000340611 DNASE1L1P49184 302 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 MLF1P58340 268 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 NANOS3P60323 173 aaKnown RBP13.37□□□□□ -0.27
BRAT1-201ENST00000340611 COTL1Q14019 142 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 PCGF3Q3KNV8 242 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 TMED4Q7Z7H5 227 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 TAAR8Q969N4 342 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 V9GY05 133 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 IGF2RP11717 2491 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 CDRT15L2A8MXV6 281 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 BCL2L11O43521 198 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 IL5P05113 134 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 LIPCP11150 499 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 GP1BBP13224 206 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 CXCR1P25024 350 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 SPINK14Q6IE38 97 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 RPL22L1Q6P5R6 122 aaKnown RBP13.37□□□□□ -0.27
BRAT1-201ENST00000340611 TMPRSS11FQ6ZWK6 438 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 NUP54Q7Z3B4 507 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 KDM8Q8N371 416 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 SEMA6DQ8NFY4 1073 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 OR10J5Q8NHC4 309 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 OCSTAMPQ9BR26 566 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 HES7Q9BYE0 225 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 SIRT7Q9NRC8 400 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 ZNF346Q9UL40 294 aaKnown RBP13.37□□□□□ -0.27
BRAT1-201ENST00000340611 WIF1Q9Y5W5 379 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 CACNA1CQ13936 2221 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 ZNF407Q9C0G0 2248 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 DNAJC13O75165 2243 aa13.37□□□□□ -0.27
BRAT1-201ENST00000340611 OR5H14A6NHG9 310 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 MCIDASD6RGH6 385 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 F13BP05160 661 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 PGCP20142 388 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 CD80P33681 288 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 MRPS10P82664 201 aaKnown RBP13.36□□□□□ -0.27
BRAT1-201ENST00000340611 FOXF1Q12946 379 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 DCAF10Q5QP82 559 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 ZNF440Q8IYI8 595 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 RNF113BQ8IZP6 322 aaKnown RBP13.36□□□□□ -0.27
BRAT1-201ENST00000340611 OR4C16Q8NGL9 310 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 ADAMTS17Q8TE56 1095 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 MAFIPQ8WZ33 124 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 GPR87Q9BY21 358 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 FN3KRPQ9HA64 309 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 RHOFQ9HBH0 211 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 PROK2Q9HC23 129 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 IER3IP1Q9Y5U9 82 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 C21orf140B9A014 251 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 C9JQL5 133 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 ACOT7O00154 380 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 ZFPL1O95159 310 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 AQP2P41181 271 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 GUCA2AQ02747 115 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 C17orf67Q0P5P2 114 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 GFI1BQ5VTD9 330 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 SLC36A1Q7Z2H8 476 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 DTX1Q86Y01 620 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 ZNF248Q8NDW4 579 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 OR8S1Q8NH09 359 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 ZPLD1Q8TCW7 415 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 ADAM19Q9H013 955 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 HAO2Q9NYQ3 351 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 TMED7-TICAM2A0A0A6YYA0 188 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 PRR32B1ATL7 298 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 PHOX2AO14813 284 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 EREGO14944 169 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 EFNA2O43921 213 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 GFRA3O60609 400 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 IFNGP01579 166 aa13.36□□□□□ -0.27
BRAT1-201ENST00000340611 OR2T7P0C7T2 308 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms