RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 TREML4Q6UXN2 200 aa16.1■□□□□ 0.17
ITGA4-202ENST00000339307 SPSB4Q96A44 273 aa16.1■□□□□ 0.17
ITGA4-202ENST00000339307 CLPTM1LQ96KA5 538 aa16.1■□□□□ 0.17
ITGA4-202ENST00000339307 FAM71F1Q96KD3 344 aaPredicted RBP16.1■□□□□ 0.17
ITGA4-202ENST00000339307 NIPSNAP1Q9BPW8 284 aa16.1■□□□□ 0.17
ITGA4-202ENST00000339307 PAPOLGQ9BWT3 736 aaKnown RBP16.1■□□□□ 0.17
ITGA4-202ENST00000339307 CHIAQ9BZP6 476 aa16.1■□□□□ 0.17
ITGA4-202ENST00000339307 OR10A2Q9H208 303 aa16.1■□□□□ 0.17
ITGA4-202ENST00000339307 BEX1Q9HBH7 125 aa16.1■□□□□ 0.17
ITGA4-202ENST00000339307 ACOXLQ9NUZ1 547 aa16.1■□□□□ 0.17
ITGA4-202ENST00000339307 ONECUT1Q9UBC0 465 aa16.1■□□□□ 0.17
ITGA4-202ENST00000339307 AQP12BA6NM10 295 aa16.09■□□□□ 0.17
ITGA4-202ENST00000339307 GNGT2O14610 69 aa16.09■□□□□ 0.17
ITGA4-202ENST00000339307 TNFRSF13BO14836 293 aaPredicted RBP16.09■□□□□ 0.17
ITGA4-202ENST00000339307 MELTFP08582 738 aa16.09■□□□□ 0.17
ITGA4-202ENST00000339307 MMP9P14780 707 aa16.09■□□□□ 0.17
ITGA4-202ENST00000339307 RAG2P55895 527 aa16.09■□□□□ 0.17
ITGA4-202ENST00000339307 CSNK2BP67870 215 aa16.09■□□□□ 0.17
ITGA4-202ENST00000339307 MS4A2Q01362 244 aa16.09■□□□□ 0.17
ITGA4-202ENST00000339307 AQP12AQ8IXF9 295 aa16.09■□□□□ 0.17
ITGA4-202ENST00000339307 OR1M1Q8NGA1 313 aa16.09■□□□□ 0.17
ITGA4-202ENST00000339307 OR4F5Q8NH21 305 aa16.09■□□□□ 0.17
ITGA4-202ENST00000339307 CCDC124Q96CT7 223 aaKnown RBP16.09■□□□□ 0.17
ITGA4-202ENST00000339307 PPP1R3EQ9H7J1 279 aa16.09■□□□□ 0.17
ITGA4-202ENST00000339307 CMC2Q9NRP2 79 aa16.09■□□□□ 0.17
ITGA4-202ENST00000339307 IGHV1-69DA0A0B4J2H0 117 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 KCNAB3O43448 404 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 ECDO95905 644 aaPredicted RBP16.08■□□□□ 0.16
ITGA4-202ENST00000339307 LHBP01229 141 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 IGHV1-69P01742 117 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 PAICSP22234 425 aaKnown RBP16.08■□□□□ 0.16
ITGA4-202ENST00000339307 CFL1P23528 166 aaKnown RBP16.08■□□□□ 0.16
ITGA4-202ENST00000339307 NAA10P41227 235 aaPredicted RBP16.08■□□□□ 0.16
ITGA4-202ENST00000339307 GSK3AP49840 483 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 ELF3P78545 371 aaPredicted RBP16.08■□□□□ 0.16
ITGA4-202ENST00000339307 IKZF1Q13422 519 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 LINC01590Q5TEZ4 76 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 TEX36Q5VZQ5 186 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 KCTD8Q6ZWB6 473 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 SHFQ7M4L6 423 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 WDR86Q86TI4 376 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 OR52H1Q8NGJ2 320 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 TBC1D15Q8TC07 691 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 GIPC3Q8TF64 312 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 THEM6Q8WUY1 208 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 RNF133Q8WVZ7 376 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 FEVQ99581 238 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 SLITRK2Q9H156 845 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 PRDM13Q9H4Q3 707 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 CNTD2Q9H8S5 307 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 RNPEPL1Q9HAU8 725 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 DNAJB11Q9UBS4 358 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 POMPQ9Y244 141 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 RHBDD3Q9Y3P4 386 aa16.08■□□□□ 0.16
ITGA4-202ENST00000339307 A0A1B0GW55 424 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 ANXA2P2A6NMY6 339 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 CDIPTO14735 213 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 GLCEO94923 617 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 CST1P01037 141 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 DUX4L2P0CJ85 424 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 DUX4L3P0CJ86 424 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 DUX4L4P0CJ87 422 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 DUX4L5P0CJ88 424 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 DUX4L6P0CJ89 424 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 DUX4L7P0CJ90 424 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 SRSF4Q08170 494 aaKnown RBP16.07■□□□□ 0.16
ITGA4-202ENST00000339307 KLHL12Q53G59 568 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 DUX4L9Q6RFH8 374 aaPredicted RBP16.07■□□□□ 0.16
ITGA4-202ENST00000339307 SLC36A1Q7Z2H8 476 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 C11orf53Q8IXP5 236 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 FGFRL1Q8N441 504 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 FTMTQ8N4E7 242 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 OR5T2Q8NGG2 359 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 SSMEM1Q8WWF3 244 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 SEH1LQ96EE3 360 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 AMELYQ99218 206 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 MICU1Q9BPX6 476 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 SIRPDQ9H106 197 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 DUX4Q9UBX2 424 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 FAM96BQ9Y3D0 163 aa16.07■□□□□ 0.16
ITGA4-202ENST00000339307 A0A1B0GUS0 222 aa16.06■□□□□ 0.16
ITGA4-202ENST00000339307 hCG_38984A0A1B0GV85 526 aa16.06■□□□□ 0.16
ITGA4-202ENST00000339307 NDUFB3O43676 98 aa16.06■□□□□ 0.16
ITGA4-202ENST00000339307 TIPRLO75663 272 aa16.06■□□□□ 0.16
ITGA4-202ENST00000339307 RAP2AP10114 183 aa16.06■□□□□ 0.16
ITGA4-202ENST00000339307 MUC1P15941 1255 aaPredicted RBP16.06■□□□□ 0.16
ITGA4-202ENST00000339307 FLOT2Q14254 428 aa16.06■□□□□ 0.16
ITGA4-202ENST00000339307 WDR38Q5JTN6 314 aa16.06■□□□□ 0.16
ITGA4-202ENST00000339307 PLBD1Q6P4A8 553 aa16.06■□□□□ 0.16
ITGA4-202ENST00000339307 WDR82Q6UXN9 313 aa16.06■□□□□ 0.16
ITGA4-202ENST00000339307 VMO1Q7Z5L0 202 aa16.06■□□□□ 0.16
ITGA4-202ENST00000339307 FAM216BQ8N7L0 139 aa16.06■□□□□ 0.16
ITGA4-202ENST00000339307 CSNK2A3Q8NEV1 391 aa16.06■□□□□ 0.16
ITGA4-202ENST00000339307 C1RLQ9NZP8 487 aa16.06■□□□□ 0.16
ITGA4-202ENST00000339307 KAAG1Q9UBP8 84 aa16.06■□□□□ 0.16
ITGA4-202ENST00000339307 RPUSD1Q9UJJ7 312 aaKnown RBP16.06■□□□□ 0.16
ITGA4-202ENST00000339307 A0A0U1RQK1 487 aa16.05■□□□□ 0.16
ITGA4-202ENST00000339307 ZNF850A8MQ14 1090 aa16.05■□□□□ 0.16
ITGA4-202ENST00000339307 PRR23D1E9PI22 279 aaPredicted RBP16.05■□□□□ 0.16
ITGA4-202ENST00000339307 PRR23D2P0DMB1 279 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms