RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 PBOV1Q9GZY1 135 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 CGGBP1Q9UFW8 167 aaPredicted RBP9.52□□□□□ -0.89
RTN3-201ENST00000338850 FBXL2Q9UKC9 423 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 FARSAQ9Y285 508 aaKnown RBP9.52□□□□□ -0.89
RTN3-201ENST00000338850 HDGFL3Q9Y3E1 203 aa9.52□□□□□ -0.89
RTN3-201ENST00000338850 SEC16AO15027 2179 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 USP9XQ93008 2570 aaPredicted RBP9.51□□□□□ -0.89
RTN3-201ENST00000338850 DOPEY2Q9Y3R5 2298 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 A0A087WZY1 265 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 C9orf170A2RU37 121 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 RAB19A4D1S5 217 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 CLEC18AA5D8T8 446 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 F8VVB4 439 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 F8VWA3 439 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 TEX46H3BTG2 121 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 SYT7O43581 403 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 TRAF3IP2O43734 574 aaPredicted RBP9.51□□□□□ -0.89
RTN3-201ENST00000338850 ALOX12BO75342 701 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 IGHG1P01857 330 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 HLA-AP01891 365 aaKnown RBP9.51□□□□□ -0.89
RTN3-201ENST00000338850 FCER2P06734 321 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 FBXO45P0C2W1 286 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 PGA4P0DJD7 388 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 PGA3P0DJD8 388 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 VSIG8P0DPA2 414 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 ECI1P42126 302 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 P2RY4P51582 365 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 LSM6P62312 80 aaKnown RBP9.51□□□□□ -0.89
RTN3-201ENST00000338850 POU3F1Q03052 451 aaPredicted RBP9.51□□□□□ -0.89
RTN3-201ENST00000338850 SPOCK1Q08629 439 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 FOXF1Q12946 379 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 SURF2Q15527 256 aaPredicted RBP9.51□□□□□ -0.89
RTN3-201ENST00000338850 OR7A5Q15622 319 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 LCN10Q6JVE6 187 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 CLEC18BQ6UXF7 455 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 PEG10Q86TG7 708 aaKnown RBP9.51□□□□□ -0.89
RTN3-201ENST00000338850 ZNF546Q86UE3 836 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 FJX1Q86VR8 437 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 TMEM17Q86X19 198 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 HOGA1Q86XE5 327 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 CLEC18CQ8NCF0 446 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 PXT1Q8NFP0 134 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 OR1J2Q8NGS2 313 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 OR10R2Q8NGX6 335 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 KCNG3Q8TAE7 436 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 SLC22A8Q8TCC7 542 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 FBXW5Q969U6 566 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 WDR89Q96FK6 387 aaPredicted RBP9.51□□□□□ -0.89
RTN3-201ENST00000338850 CXorf58Q96LI9 332 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 LINC00052Q96N35 136 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 SLC6A7Q99884 636 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 CHST6Q9GZX3 395 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 CNTD2Q9H8S5 307 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 BARX1Q9HBU1 254 aaPredicted RBP9.51□□□□□ -0.89
RTN3-201ENST00000338850 SLC22A11Q9NSA0 550 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 C19orf25Q9UFG5 118 aaPredicted RBP9.51□□□□□ -0.89
RTN3-201ENST00000338850 GTF2A1LQ9UNN4 478 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 VSIG4Q9Y279 399 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 WIF1Q9Y5W5 379 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 KIAA1549Q9HCM3 1950 aa9.51□□□□□ -0.89
RTN3-201ENST00000338850 USP9YO00507 2555 aaPredicted RBP9.5□□□□□ -0.89
RTN3-201ENST00000338850 CACNA1CQ13936 2221 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 TMEM235A6NFC5 223 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 WIPF3A6NGB9 483 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 DHRS7CA6NNS2 312 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 MPTX1A8MV57 137 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 P2RY10O00398 339 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 PRKNO60260 465 aaPredicted RBP9.5□□□□□ -0.89
RTN3-201ENST00000338850 SIX6O95475 246 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 KLK3P07288 261 aaPredicted RBP9.5□□□□□ -0.89
RTN3-201ENST00000338850 HLA-DOBP13765 273 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 PRF1P14222 555 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 PTGDSP41222 190 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 ZNF41P51814 821 aaPredicted RBP9.5□□□□□ -0.89
RTN3-201ENST00000338850 SRSF1Q07955 248 aaKnown RBP eCLIP9.5□□□□□ -0.892e-7■■□□□ 13.4
RTN3-201ENST00000338850 CHAF1BQ13112 559 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 ODF4Q2M2E3 257 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 MOGAT2Q3SYC2 334 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 PAN3Q58A45 887 aaKnown RBP9.5□□□□□ -0.89
RTN3-201ENST00000338850 SFRP5Q5T4F7 317 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 ZNF385CQ66K41 422 aaPredicted RBP9.5□□□□□ -0.89
RTN3-201ENST00000338850 AWAT2Q6E213 333 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 POMZP3Q6PJE2 187 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 LRFN4Q6PJG9 635 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 CORO6Q6QEF8 472 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 ALKAL2Q6UX46 152 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 LANCL3Q6ZV70 420 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 DOK3Q7L591 496 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.5□□□□□ -0.89
RTN3-201ENST00000338850 TRAPPC6BQ86SZ2 158 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 UEVLDQ8IX04 471 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 FAM89BQ8N5H3 189 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 FADS6Q8N9I5 356 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 OR10S1Q8NGN2 331 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 ADAMTS17Q8TE56 1095 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 DVL3Q92997 716 aaPredicted RBP9.5□□□□□ -0.89
RTN3-201ENST00000338850 NTNG2Q96CW9 530 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 CCDC120Q96HB5 630 aa9.5□□□□□ -0.89
RTN3-201ENST00000338850 C1orf147Q96MC9 270 aaPredicted RBP9.5□□□□□ -0.89
RTN3-201ENST00000338850 C5orf34Q96MH7 638 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms