RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 NQO2P16083 231 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 APOBEC1P41238 236 aaKnown RBP5.79□□□□□ -1.48
HMG20A-201ENST00000336216 CX3CR1P49238 355 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 RGS19P49795 217 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 PLEKHN1Q494U1 663 aaPredicted RBP5.79□□□□□ -1.48
HMG20A-201ENST00000336216 PHLDA2Q53GA4 152 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 SHEQ5VZ18 495 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 ACOT7LQ6ZUV0 252 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 OVCH2Q7RTZ1 564 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 C20orf196Q8IYI0 205 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 KCNRGQ8N5I3 272 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 SUMF1Q8NBK3 374 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 ZNF485Q8NCK3 441 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 SCGB3A2Q96PL1 93 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 TSPAN32Q96QS1 320 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 TWSG1Q9GZX9 223 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 MTFP1Q9UDX5 166 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 PCOLCE2Q9UKZ9 415 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 URGCP-MRPS24S4R325 110 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 SPTBN5Q9NRC6 3674 aaKnown RBP5.79□□□□□ -1.48
HMG20A-201ENST00000336216 DOCK10Q96BY6 2186 aa5.79□□□□□ -1.48
HMG20A-201ENST00000336216 E9PQ18 207 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 FABP1P07148 127 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 S100A2P29034 98 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 ACAA2P42765 397 aaKnown RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 RPS10P46783 165 aaKnown RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 CLDN15P56746 228 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 FOXK1P85037 733 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 SPEM2Q0P670 501 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 SPATA46Q5T0L3 261 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 SPINK14Q6IE38 97 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 EIF5AL1Q6IS14 154 aaKnown RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 GCNT2Q8N0V5 402 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 SYS1Q8N2H4 156 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 CADM4Q8NFZ8 388 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 ZNRF4Q8WWF5 429 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 SPACA9Q96E40 222 aaPredicted RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 CDH20Q9HBT6 801 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 ZMAT5Q9UDW3 170 aaKnown RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 NDRG3Q9UGV2 375 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 BOKQ9UMX3 212 aaPredicted RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 LRP12Q9Y561 859 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 PUS1Q9Y606 427 aaKnown RBP eCLIP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 RALGAPA1Q6GYQ0 2036 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 TMEM218A2RU14 115 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 OR6C65A6NJZ3 312 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 XRCC3O43542 346 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 NGFRP08138 427 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 FGF2P09038 288 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 CD53P19397 219 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 IL11P20809 199 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 GALP22466 123 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 RSPO4Q2I0M5 234 aaPredicted RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 SLC35D3Q5M8T2 416 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 C11orf87Q6NUJ2 197 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 ZNF529Q6P280 563 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 TMPRSS7Q7RTY8 843 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 STX12Q86Y82 276 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 OR51A2Q8NGJ7 313 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 MARCH1Q8TCQ1 289 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 RNF141Q8WVD5 230 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 SECTM1Q8WVN6 248 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 KISS1RQ969F8 398 aaPredicted RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 PLPPR2Q96GM1 343 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 MENTQ9BUN1 341 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 NPDC1Q9NQX5 325 aaPredicted RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 FAM86C1Q9NVL1 165 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 PTPRSQ13332 1948 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 TCF20Q9UGU0 1960 aaKnown RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 CEP295Q9C0D2 2601 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 LOC100289279A0A1B0GTE1 492 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 HMSDA8MTL9 139 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 DNASE2O00115 360 aaPredicted RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 ABCD4O14678 606 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 TNFSF14O43557 240 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 CTAG2O75638 210 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 SNAPC5O75971 98 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 CPN1P15169 458 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 EPHA8P29322 1005 aaPredicted RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 NPBWR1P48145 328 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 ZNF121P58317 390 aaPredicted RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 FZD5Q13467 585 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 PPP1R1AQ13522 171 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 FAM189A2Q15884 450 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 FAM209BQ5JX69 171 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 C6orf15Q6UXA7 325 aaPredicted RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 RABEPKQ7Z6M1 372 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 LDLRAD3Q86YD5 345 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 NAXDQ8IW45 347 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 C9orf40Q8IXQ3 194 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 NPEPL1Q8NDH3 523 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 GJC3Q8NFK1 279 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 OR52N5Q8NH56 324 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 SFT2D1Q8WV19 159 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 LIPHQ8WWY8 451 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 RGP1Q92546 391 aaPredicted RBP5.78□□□□□ -1.48
HMG20A-201ENST00000336216 AKR1E2Q96JD6 320 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 PIGQQ9BRB3 760 aa5.78□□□□□ -1.48
HMG20A-201ENST00000336216 ZNF649Q9BS31 505 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms