RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 C17orf105B2RV13 164 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 GUSBP08236 651 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 TBPP20226 339 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 GLRA1P23415 457 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 TAS2R60P59551 318 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 RAB33BQ9H082 229 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 PISDQ9UG56 409 aa12.21□□□□□ -0.45
SYNE3-201ENST00000334258 FANCMQ8IYD8 2048 aa12.21□□□□□ -0.46
SYNE3-201ENST00000334258 IGLV1-36A0A0B4J1U3 117 aa12.21□□□□□ -0.46
SYNE3-201ENST00000334258 ZNF354AO60765 605 aaPredicted RBP12.21□□□□□ -0.46
SYNE3-201ENST00000334258 PRH1P02810 166 aa12.21□□□□□ -0.46
SYNE3-201ENST00000334258 NME1P15531 152 aaKnown RBP12.21□□□□□ -0.46
SYNE3-201ENST00000334258 AGAP20933 346 aa12.21□□□□□ -0.46
SYNE3-201ENST00000334258 ACKR3P25106 362 aa12.21□□□□□ -0.46
SYNE3-201ENST00000334258 SULT1A2P50226 295 aa12.21□□□□□ -0.46
SYNE3-201ENST00000334258 NFATC4Q14934 902 aa12.21□□□□□ -0.46
SYNE3-201ENST00000334258 ZNF248Q8NDW4 579 aa12.21□□□□□ -0.46
SYNE3-201ENST00000334258 NRSN2Q9GZP1 204 aa12.21□□□□□ -0.46
SYNE3-201ENST00000334258 GPR132Q9UNW8 380 aa12.21□□□□□ -0.46
SYNE3-201ENST00000334258 MTCH2Q9Y6C9 303 aa12.21□□□□□ -0.46
SYNE3-201ENST00000334258 CXorf65A6NEN9 183 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 MPZP25189 248 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 RPL12P30050 165 aaKnown RBP12.2□□□□□ -0.46
SYNE3-201ENST00000334258 ZNF93P35789 620 aaPredicted RBP12.2□□□□□ -0.46
SYNE3-201ENST00000334258 SLC6A9P48067 706 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 GSK3AP49840 483 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 FMODQ06828 376 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 IAH1Q2TAA2 248 aaPredicted RBP12.2□□□□□ -0.46
SYNE3-201ENST00000334258 CDPF1Q6NVV7 123 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 BTNL8Q6UX41 500 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 OR9K2Q8NGE7 335 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 MAFIPQ8WZ33 124 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 TMEM230Q96A57 120 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 SCGB3A2Q96PL1 93 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 OR11A1Q9GZK7 315 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 WNT5BQ9H1J7 359 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 SLC26A1Q9H2B4 701 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 SEBOXQ9HB31 216 aaPredicted RBP12.2□□□□□ -0.46
SYNE3-201ENST00000334258 LSM5Q9Y4Y9 91 aaKnown RBP12.2□□□□□ -0.46
SYNE3-201ENST00000334258 RHPN2P1A8MT19 583 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 TAAR5O14804 337 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 CST4P01036 141 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 CELA2BP08218 269 aaPredicted RBP12.2□□□□□ -0.46
SYNE3-201ENST00000334258 IFI6P09912 130 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 GP1BBP13224 206 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 ITGA3P26006 1051 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 CRABP1P29762 137 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 FCGR2CP31995 323 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 HMGN3Q15651 99 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 MIDNQ504T8 468 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 DMRTC1Q5HYR2 192 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 KLHL24Q6TFL4 600 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 CLEC9AQ6UXN8 241 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 PPP1R3BQ86XI6 285 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 TGIF2LXQ8IUE1 241 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 ZNF321PQ8N8H1 164 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 SCARF2Q96GP6 870 aaPredicted RBP12.2□□□□□ -0.46
SYNE3-201ENST00000334258 GPER1Q99527 375 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 CDCA3Q99618 268 aaPredicted RBP12.2□□□□□ -0.46
SYNE3-201ENST00000334258 SOX7Q9BT81 388 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 EGLN1Q9GZT9 426 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 TXNIPQ9H3M7 391 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 TIMM10BQ9Y5J6 103 aa12.2□□□□□ -0.46
SYNE3-201ENST00000334258 AP4M1O00189 453 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 SOCS1O15524 211 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 PLRG1O43660 514 aaKnown RBP12.19□□□□□ -0.46
SYNE3-201ENST00000334258 BPNT1O95861 308 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 BGLAPP02818 100 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 GLIPR1L1Q6UWM5 242 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 UNQ6494/PRO21346Q6UXR6 183 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 OR5D14Q8NGL3 314 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 ADAT3Q96EY9 351 aaPredicted RBP12.19□□□□□ -0.46
SYNE3-201ENST00000334258 G6PC2Q9NQR9 355 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 PARP11Q9NR21 331 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 DNAJB11Q9UBS4 358 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 FBXL17Q9UF56 701 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 SPAG17Q6Q759 2223 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 OR8U8P0C7N1 319 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 ZNF20P17024 532 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 RBMXP38159 391 aaKnown RBP12.19□□□□□ -0.46
SYNE3-201ENST00000334258 ZNF117Q03924 483 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 TDGQ13569 410 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 PEG10Q86TG7 708 aaKnown RBP12.19□□□□□ -0.46
SYNE3-201ENST00000334258 SMRP1Q8NCR6 262 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 OCSTAMPQ9BR26 566 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 TBL1XR1Q9BZK7 514 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 RTN4RQ9BZR6 473 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 RTTNQ86VV8 2226 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 A0A1W2PPE2 198 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 UMAD1C9J7I0 102 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 SCGNO76038 276 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 HSD11B1P28845 292 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 CSNK2A1P68400 391 aaPredicted RBP12.19□□□□□ -0.46
SYNE3-201ENST00000334258 SGCBQ16585 318 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 CARFQ8N187 725 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 ARRDC1Q8N5I2 433 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 TMEM104Q8NE00 496 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 CSNK2A3Q8NEV1 391 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 FOXQ1Q9C009 403 aa12.19□□□□□ -0.46
SYNE3-201ENST00000334258 TMPRSS5Q9H3S3 457 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms