RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 OR6S1Q8NH40 331 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 DYNLRB2Q8TF09 96 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 LTB4R2Q9NPC1 389 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 SP1P08047 785 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 FGF8P55075 233 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-201ENST00000331920 CLLU1Q5K131 121 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 CLDN22Q8N7P3 220 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 RPEQ96AT9 228 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 CDCA3Q99618 268 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-201ENST00000331920 CXorf36Q9H7Y0 433 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 COX7A1P24310 79 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 SUCLG1P53597 346 aaKnown RBP14.87□□□□□ -0.03
PTCH1-201ENST00000331920 TMEM102Q8N9M5 508 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-201ENST00000331920 FLYWCH2Q96CP2 140 aaKnown RBP14.87□□□□□ -0.03
PTCH1-201ENST00000331920 SLC7A10Q9NS82 523 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 A0A1B0GX78 115 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 TCRBV3S1A0A5B6 114 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 SLC2A10O95528 541 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 FURINP09958 794 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 PTBP1P26599 531 aaKnown RBP eCLIP14.87□□□□□ -0.033e-8■■■■□ 20.8
PTCH1-201ENST00000331920 OR1C1Q15619 314 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 MARCH5Q9NX47 278 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 COA4Q9NYJ1 87 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 HIST1H1CP16403 213 aaKnown RBP14.87□□□□□ -0.03
PTCH1-201ENST00000331920 NUDT10Q8NFP7 164 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 NUDT11Q96G61 164 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 CXorf58Q96LI9 332 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 ZNF324O75467 553 aaPredicted RBP14.87□□□□□ -0.03
PTCH1-201ENST00000331920 IHHQ14623 411 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 PDCD1Q15116 288 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 SLC35D3Q5M8T2 416 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 LYSMD2Q8IV50 215 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 ATP5SQ99766 215 aa14.87□□□□□ -0.03
PTCH1-201ENST00000331920 APOBEC1P41238 236 aaKnown RBP14.86□□□□□ -0.03
PTCH1-201ENST00000331920 SLC25A26Q70HW3 274 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 LRRTM3Q86VH5 581 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 ZNF485Q8NCK3 441 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 AMDHD2Q9Y303 409 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 OR5B21A6NL26 309 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 ANKRD34AQ69YU3 496 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 GPX8Q8TED1 209 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 TREM2Q9NZC2 230 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 RNF24Q9Y225 148 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 M0R1X1 148 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 OR4C16Q8NGL9 310 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 SLC25A46Q96AG3 418 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 MMP17Q9ULZ9 603 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 IVDP26440 423 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 ANKLE1Q8NAG6 615 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 CA5BP1Q8WTZ4 195 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 FAM90A27PA6NNH2 459 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 OR2I1PQ8NGU4 316 aa14.86□□□□□ -0.03
PTCH1-201ENST00000331920 ZNF346Q9UL40 294 aaKnown RBP14.86□□□□□ -0.03
PTCH1-201ENST00000331920 SEBOXQ9HB31 216 aaPredicted RBP14.86□□□□□ -0.03
PTCH1-201ENST00000331920 GEMIN2O14893 280 aaKnown RBP14.85□□□□□ -0.03
PTCH1-201ENST00000331920 CEACAM6P40199 344 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 KISS1RQ969F8 398 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-201ENST00000331920 GRAMD2BQ96HH9 432 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 IL17CQ9P0M4 197 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 PRKNO60260 465 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-201ENST00000331920 OR4E1P0C645 316 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 VMA21Q3ZAQ7 101 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 PHYHIPLQ96FC7 376 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 CLEC1BQ9P126 229 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 MIA3Q5JRA6 1907 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 MT-ATP6P00846 226 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 OR3A4PP47883 348 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 LYG1Q8N1E2 194 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 PPP1R1CQ8WVI7 109 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 IGKV3D-15A0A087WSY6 115 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 IGKV3-15P01624 115 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 SHHQ15465 462 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 MYOZ3Q8TDC0 251 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 ABHD3Q8WU67 409 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 CCL17Q92583 94 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 TMEM56Q96MV1 263 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 NWD2Q9ULI1 1742 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 B4GALT1P15291 398 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 RPS19P39019 145 aaKnown RBP14.85□□□□□ -0.03
PTCH1-201ENST00000331920 ZNF121P58317 390 aaPredicted RBP14.85□□□□□ -0.03
PTCH1-201ENST00000331920 HTRA3P83110 453 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 GMPR2Q9P2T1 348 aaKnown RBP14.85□□□□□ -0.03
PTCH1-201ENST00000331920 FAM78AQ5JUQ0 283 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 ASB13Q8WXK3 278 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 PLEKHA2Q9HB19 425 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 ARID1AO14497 2285 aa14.85□□□□□ -0.03
PTCH1-201ENST00000331920 TLCD2A6NGC4 264 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 CDAP32320 146 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 ZNF740Q8NDX6 193 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 EXTL1Q92935 676 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 PPT2Q9UMR5 302 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 TMEM218A2RU14 115 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 DEFB103AP81534 67 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 TMEM207Q6UWW9 146 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 ADPRHL1Q8NDY3 354 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 TBX15Q96SF7 602 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 A4GALTQ9NPC4 353 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 DIMT1Q9UNQ2 313 aaKnown RBP14.84□□□□□ -0.03
PTCH1-201ENST00000331920 LIPNQ5VXI9 398 aa14.84□□□□□ -0.03
PTCH1-201ENST00000331920 EDARADDQ8WWZ3 215 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 254 ms