RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 HLXQ14774 488 aaPredicted RBP13.03□□□□□ -0.32
CLCNKA-201ENST00000331433 CLLU1Q5K131 121 aa13.03□□□□□ -0.32
CLCNKA-201ENST00000331433 LIN54Q6MZP7 749 aa13.03□□□□□ -0.32
CLCNKA-201ENST00000331433 TMUB2Q71RG4 321 aa13.03□□□□□ -0.32
CLCNKA-201ENST00000331433 OR10K1Q8NGX5 313 aa13.03□□□□□ -0.32
CLCNKA-201ENST00000331433 ARL6Q9H0F7 186 aa13.03□□□□□ -0.32
CLCNKA-201ENST00000331433 FN3KRPQ9HA64 309 aa13.03□□□□□ -0.32
CLCNKA-201ENST00000331433 KCNN3Q9UGI6 736 aa13.03□□□□□ -0.32
CLCNKA-201ENST00000331433 HMSDA8MTL9 139 aa13.02□□□□□ -0.32
CLCNKA-201ENST00000331433 STMND1H3BQB6 276 aa13.02□□□□□ -0.32
CLCNKA-201ENST00000331433 CCSO14618 274 aa13.02□□□□□ -0.32
CLCNKA-201ENST00000331433 JMJD7P0C870 316 aa13.02□□□□□ -0.32
CLCNKA-201ENST00000331433 PATE4P0C8F1 98 aa13.02□□□□□ -0.32
CLCNKA-201ENST00000331433 PRSS12P56730 875 aa13.02□□□□□ -0.32
CLCNKA-201ENST00000331433 MRPS34P82930 218 aaKnown RBP13.02□□□□□ -0.32
CLCNKA-201ENST00000331433 FAM27BQ5VT28 67 aa13.02□□□□□ -0.32
CLCNKA-201ENST00000331433 OR4K15Q8NH41 348 aa13.02□□□□□ -0.32
CLCNKA-201ENST00000331433 PIGTQ969N2 578 aa13.02□□□□□ -0.32
CLCNKA-201ENST00000331433 SF3B5Q9BWJ5 86 aaKnown RBP13.02□□□□□ -0.32
CLCNKA-201ENST00000331433 ZNF224Q9NZL3 707 aa13.02□□□□□ -0.32
CLCNKA-201ENST00000331433 V9GYS6 101 aa13.02□□□□□ -0.32
CLCNKA-201ENST00000331433 LNP1A1A4G5 178 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 ZNF716A6NP11 495 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 IFNA6P05013 189 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 PRF1P14222 555 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 B4GALT1P15291 398 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 PTGFRP43088 359 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 CYB561P49447 251 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 CLDN15P56746 228 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 MICBQ29980 383 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 H3F3CQ6NXT2 135 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 DBX2Q6ZNG2 339 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 SLC25A42Q86VD7 318 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 NAXDQ8IW45 347 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 PNLDC1Q8NA58 520 aaKnown RBP13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 ADAD2Q8NCV1 583 aaKnown RBP13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 OR10D3Q8NH80 312 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 OR2AE1Q8NHA4 323 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 KCNE4Q8WWG9 221 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 PSMF1Q92530 271 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 INTS12Q96CB8 462 aaKnown RBP13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 GSX2Q9BZM3 304 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 AUP1Q9Y679 476 aa13.02□□□□□ -0.33
CLCNKA-201ENST00000331433 TRAV14DV4A0A0A6YYC5 116 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 OR6C65A6NJZ3 312 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 C9orf172C9J069 976 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 SERPINA7P05543 415 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 FCGR2AP12318 317 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 ZBTB25P24278 435 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 MPZP25189 248 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 GDF1P27539 372 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 THBS4P35443 961 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 AP2S1P53680 142 aaPredicted RBP13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 RAB14P61106 215 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 TOR2AQ5JU69 321 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 SPINK14Q6IE38 97 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 ZNF774Q6NX45 483 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 COMMD7Q86VX2 200 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 OR56B1Q8NGI3 324 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 OR51T1Q8NGJ9 327 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 OR5M8Q8NGP6 311 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 STRADBQ9C0K7 418 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 CHST5Q9GZS9 411 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 FOXJ2Q9P0K8 574 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 DNPH1O43598 174 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 GSTP1P09211 210 aaKnown RBP13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 SERPINA2P20848 420 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 RFC3P40938 356 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 GMFBP60983 142 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 HGFACQ04756 655 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 CLVS2Q5SYC1 327 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 ST8SIA4Q92187 359 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 SPTSSAQ969W0 71 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 ADGRG7Q96K78 797 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 TAAR9Q96RI9 348 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 SLX1AQ9BQ83 275 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 URM1Q9BTM9 101 aaKnown RBP13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 OR10A2Q9H208 303 aa13.01□□□□□ -0.33
CLCNKA-201ENST00000331433 A0A1W2PNU3 283 aaPredicted RBP13□□□□□ -0.33
CLCNKA-201ENST00000331433 MFNGO00587 321 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 SGCEO43556 437 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 RP2O75695 350 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 MGMTP16455 207 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 AKR1C4P17516 323 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 VAMP1P23763 118 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 RPS27AP62979 156 aaKnown RBP13□□□□□ -0.33
CLCNKA-201ENST00000331433 ZMYND11Q15326 602 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 NHLRC3Q5JS37 347 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 ALKAL2Q6UX46 152 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 AAED1Q7RTV5 226 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 LYG2Q86SG7 212 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 ZDHHC22Q8N966 263 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 OR2V1Q8NHB1 315 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 MARCH1Q8TCQ1 289 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 CASTOR1Q8WTX7 329 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 SGK3Q96BR1 496 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 ZNF845Q96IR2 970 aaPredicted RBP13□□□□□ -0.33
CLCNKA-201ENST00000331433 SEC22AQ96IW7 307 aa13□□□□□ -0.33
CLCNKA-201ENST00000331433 THOC3Q96J01 351 aaKnown RBP13□□□□□ -0.33
CLCNKA-201ENST00000331433 ELL3Q9HB65 397 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms