RNA–Protein interactions for RNA: ENST00000325599.12

SHQ1-201, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHQ1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-201ENST00000325599 CX3CR1P49238 355 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 CLDN17P56750 224 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 MEF2DQ14814 521 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 BEX5Q5H9J7 111 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 RELL2Q8NC24 303 aaPredicted RBP14.44□□□□□ -0.1
SHQ1-201ENST00000325599 OR1S1Q8NH92 325 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 ELP5Q8TE02 316 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 GNRHR2Q96P88 292 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 LPAR5Q9H1C0 372 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 FN3KRPQ9HA64 309 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 ZNF107Q9UII5 783 aaPredicted RBP14.44□□□□□ -0.1
SHQ1-201ENST00000325599 ZNF726A6NNF4 738 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 GPR31O00270 319 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 STK17BO94768 372 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 MPIG6BO95866 241 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 KLK3P07288 261 aaPredicted RBP14.44□□□□□ -0.1
SHQ1-201ENST00000325599 RPA2P15927 270 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 ZBTB25P24278 435 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 AVPR2P30518 371 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 ATXN7L3Q14CW9 347 aaPredicted RBP14.44□□□□□ -0.1
SHQ1-201ENST00000325599 PCOLCEQ15113 449 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 PLAC9Q5JTB6 97 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 FADS6Q8N9I5 356 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 WNT2BQ93097 391 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 C1orf147Q96MC9 270 aaPredicted RBP14.44□□□□□ -0.1
SHQ1-201ENST00000325599 PRRT1Q99946 306 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 MYOZ1Q9NP98 299 aaPredicted RBP14.44□□□□□ -0.1
SHQ1-201ENST00000325599 C19orf25Q9UFG5 118 aaPredicted RBP14.44□□□□□ -0.1
SHQ1-201ENST00000325599 PISDQ9UG56 409 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 PLEKHA6Q9Y2H5 1048 aa14.44□□□□□ -0.1
SHQ1-201ENST00000325599 MRPS28Q9Y2Q9 187 aaKnown RBP14.44□□□□□ -0.1
SHQ1-201ENST00000325599 TSC22D1Q15714 1073 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 PHYHD1Q5SRE7 291 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 HSD17B13Q7Z5P4 300 aaPredicted RBP14.43□□□□□ -0.1
SHQ1-201ENST00000325599 SLC25A42Q86VD7 318 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 DTX1Q86Y01 620 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 PDZD9Q8IXQ8 264 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 ZNF283Q8N7M2 679 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 CASTOR1Q8WTX7 329 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 MICU1Q9BPX6 476 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 PDCD10Q9BUL8 212 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 WDR13Q9H1Z4 485 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 AQP7P3A6NL99 342 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 AKR1C4P17516 323 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 HIST3H3Q16695 136 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 ADPRHL1Q8NDY3 354 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 LIN37Q96GY3 246 aaPredicted RBP14.43□□□□□ -0.1
SHQ1-201ENST00000325599 TMEM41AQ96HV5 264 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 MED9Q9NWA0 146 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 SLC2A8Q9NY64 477 aa14.43□□□□□ -0.1
SHQ1-201ENST00000325599 SNAPC5O75971 98 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 ONECUT2O95948 504 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 ERCC1P07992 297 aaPredicted RBP14.42□□□□□ -0.1
SHQ1-201ENST00000325599 HCKP08631 526 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 OR5D18Q8NGL1 313 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 OR6K3Q8NGY3 331 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 NPRL2Q8WTW4 380 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 SLC26A1Q9H2B4 701 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 IGKV1-9A0A0C4DH69 117 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 C9orf170A2RU37 121 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 CD8AP01732 235 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 VAMP1P23763 118 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 CASRP41180 1078 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 IL13RA1P78552 427 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 ELP2Q6IA86 826 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 LYG2Q86SG7 212 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 NAXDQ8IW45 347 aa14.42□□□□□ -0.1
SHQ1-201ENST00000325599 A0A1B0GV90 55 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 KCNAB3O43448 404 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 CCL3P10147 92 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 CALCRP30988 508 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 ATP1B3P54709 279 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 TMEM50BP56557 158 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 TMPPEQ6ZT21 453 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 KCTD9Q7L273 389 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 PPP1R1CQ8WVI7 109 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 EDAQ92838 391 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 FBXO17Q96EF6 278 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 ZNF385AQ96PM9 386 aaKnown RBP14.41□□□□□ -0.1
SHQ1-201ENST00000325599 UCN2Q96RP3 112 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 GAREM1Q9H706 876 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 GPN3Q9UHW5 284 aaPredicted RBP14.41□□□□□ -0.1
SHQ1-201ENST00000325599 RAD51DO75771 328 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 UMODP07911 640 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 CCL4P13236 92 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 PTGFRP43088 359 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 DBX2Q6ZNG2 339 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 STX12Q86Y82 276 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 DMRTC2Q8IXT2 367 aaPredicted RBP14.41□□□□□ -0.1
SHQ1-201ENST00000325599 BPIFCQ8NFQ6 507 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 IFI44Q8TCB0 444 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 MARCH1Q8TCQ1 289 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 ZC3H10Q96K80 434 aaKnown RBP14.41□□□□□ -0.1
SHQ1-201ENST00000325599 JSRP1Q96MG2 331 aaPredicted RBP14.41□□□□□ -0.1
SHQ1-201ENST00000325599 HDGFL3Q9Y3E1 203 aa14.41□□□□□ -0.1
SHQ1-201ENST00000325599 CDC14BO60729 498 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 IFNA4P05014 189 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 CRYBA1P05813 215 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 RFC3P40938 356 aa14.4□□□□□ -0.1
SHQ1-201ENST00000325599 C1QL2Q7Z5L3 287 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms