RNA–Protein interactions for RNA: ENST00000325307.11

HMGB3-201, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 3,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-201ENST00000325307 AZGP1P25311 298 aaKnown RBP8.72□□□□□ -1.01
HMGB3-201ENST00000325307 THBS2P35442 1172 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 RFX2P48378 723 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 TLE1Q04724 770 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 TMEM244Q5VVB8 128 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 DRAM2Q6UX65 266 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 OR4M1Q8NGD0 313 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 RGP1Q92546 391 aaPredicted RBP8.72□□□□□ -1.01
HMGB3-201ENST00000325307 SLC17A5Q9NRA2 495 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 COQ3Q9NZJ6 369 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 HHLA2Q9UM44 414 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 DHDHQ9UQ10 334 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 A0A1B0GVI7 797 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 ZNF98A6NK75 572 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 ZNF879B4DU55 563 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 CASKO14936 926 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 SYT7O43581 403 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 TTRP02766 147 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 CRYGSP22914 178 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 MYL9P24844 172 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 RPS11P62280 158 aaKnown RBP eCLIP8.72□□□□□ -1.01
HMGB3-201ENST00000325307 FAM27E3Q08E93 113 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 MADCAM1Q13477 382 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 IGFBP7Q16270 282 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 RSPO1Q2MKA7 263 aaPredicted RBP8.72□□□□□ -1.01
HMGB3-201ENST00000325307 Q499Y3 187 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 PAMR1Q6UXH9 720 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 RELL2Q8NC24 303 aaPredicted RBP8.72□□□□□ -1.01
HMGB3-201ENST00000325307 OR13C3Q8NGS6 347 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 FAM71F1Q96KD3 344 aaPredicted RBP8.72□□□□□ -1.01
HMGB3-201ENST00000325307 OR10A2Q9H208 303 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 B3GNT2Q9NY97 397 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 ZFYVE26Q68DK2 2539 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 IGSF10Q6WRI0 2623 aa8.72□□□□□ -1.01
HMGB3-201ENST00000325307 LEUTXA8MZ59 168 aa8.71□□□□□ -1.01
HMGB3-201ENST00000325307 TOR1AO14656 332 aa8.71□□□□□ -1.01
HMGB3-201ENST00000325307 HPGDSO60760 199 aa8.71□□□□□ -1.01
HMGB3-201ENST00000325307 ACSM4P0C7M7 580 aa8.71□□□□□ -1.01
HMGB3-201ENST00000325307 MAPK3P27361 379 aaPredicted RBP8.71□□□□□ -1.01
HMGB3-201ENST00000325307 XKRXQ6PP77 449 aa8.71□□□□□ -1.01
HMGB3-201ENST00000325307 BTN2A1Q7KYR7 527 aa8.71□□□□□ -1.01
HMGB3-201ENST00000325307 C17orf78Q8N4C9 275 aa8.71□□□□□ -1.01
HMGB3-201ENST00000325307 OR5H6Q8NGV6 325 aa8.71□□□□□ -1.01
HMGB3-201ENST00000325307 RPS4Y2Q8TD47 263 aa8.71□□□□□ -1.01
HMGB3-201ENST00000325307 S100PBPQ96BU1 408 aa8.71□□□□□ -1.01
HMGB3-201ENST00000325307 ORAI1Q96D31 301 aa8.71□□□□□ -1.01
HMGB3-201ENST00000325307 MUCL1Q96DR8 90 aa8.71□□□□□ -1.01
HMGB3-201ENST00000325307 NOX4Q9NPH5 578 aa8.71□□□□□ -1.01
HMGB3-201ENST00000325307 ESPL1Q14674 2120 aa8.71□□□□□ -1.01
HMGB3-201ENST00000325307 LOC100509620A0A075B734 347 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 OR5H1A6NKK0 313 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 FAM90A27PA6NNH2 459 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 GATBO75879 557 aaKnown RBP8.71□□□□□ -1.02
HMGB3-201ENST00000325307 ARL6IP5O75915 188 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 OTX1P32242 354 aaPredicted RBP8.71□□□□□ -1.02
HMGB3-201ENST00000325307 OR10A3P58181 314 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 AARDQ4LEZ3 155 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 HSD17B12Q53GQ0 312 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 SLC30A7Q8NEW0 376 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 TMEM106AQ96A25 262 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 OR51B6Q9H340 312 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 GPR84Q9NQS5 396 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 SSX5O60225 188 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 SNAPINO95295 136 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 SERPINA5P05154 406 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 CD2P06729 351 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 CSF3P09919 207 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 IL7P13232 177 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 ACHEP22303 614 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 GNLYP22749 145 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 HGFACQ04756 655 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 P2RY14Q15391 338 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 ZNF767PQ75MW2 155 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 WDR31Q8NA23 367 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 OR52H1Q8NGJ2 320 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 ACTR6Q9GZN1 396 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 ZNF319Q9P2F9 582 aa8.71□□□□□ -1.02
HMGB3-201ENST00000325307 C5orf63A6NC05 138 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 LINC00862A6NCI5 91 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 PRB1P04280 392 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 CELA3BP08861 270 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 PSMB1P20618 241 aaKnown RBP8.7□□□□□ -1.02
HMGB3-201ENST00000325307 VAMP1P23763 118 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 GNALP38405 381 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 UQCRFS1P47985 274 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 DEFA1P59665 94 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 DEFA3P59666 94 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 TBC1D28Q2M2D7 210 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 SNAI3Q3KNW1 292 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 STEAP2Q8NFT2 490 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 NEDD4LQ96PU5 975 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 PPP1R3EQ9H7J1 279 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 PLEKHA1Q9HB21 404 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 CDH20Q9HBT6 801 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 AMDHD2Q9Y303 409 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 A0A1W2PQ09 198 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 ANKRD61A6NGH8 418 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 PRSS44E7EML9 344 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 C16orf97H3BN30 126 aa8.7□□□□□ -1.02
HMGB3-201ENST00000325307 COX5BP10606 129 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms