RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 MED19A0JLT2 244 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 OR5H15A6NDH6 313 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 TRIM77I1YAP6 450 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 SSX5O60225 188 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 PRH1P02810 166 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 DBHP09172 617 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 CTRB1P17538 263 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 RAB6AP20340 208 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 PLAC9Q5JTB6 97 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 CTRB2Q6GPI1 263 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 DEGS2Q6QHC5 323 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 DNM1P46Q6ZS02 220 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 C6orf201Q7Z4U5 140 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 PUSL1Q8N0Z8 303 aaKnown RBP11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 D2HGDHQ8N465 521 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 APCDD1LQ8NCL9 501 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 OR5AP2Q8NGF4 316 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 GNRHR2Q96P88 292 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 HDHD3Q9BSH5 251 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 AKIRIN1Q9H9L7 192 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 B3GALT1Q9Y5Z6 326 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 ZNF814B7Z6K7 855 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 ABCD4O14678 606 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 TO15178 435 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 GDF9O60383 454 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 CD8AP01732 235 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 TAF9Q16594 264 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 SP6Q3SY56 376 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 ABCA11PQ4W5N1 156 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 OR5T2Q8NGG2 359 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 NECAB3Q96P71 396 aaPredicted RBP11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 TWSG1Q9GZX9 223 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 GPR173Q9NS66 373 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 PIGLQ9Y2B2 252 aa11.4□□□□□ -0.58
HMGCS1-201ENST00000325110 C5orf63A6NC05 138 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 SCGNO76038 276 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 ATG12O94817 140 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 F10P00742 488 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 ISG15P05161 165 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 CELA2AP08217 269 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 KISS1Q15726 138 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 FAM76BQ5HYJ3 339 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 FAM180AQ6UWF9 173 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 TFAP2EQ6VUC0 442 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 SLC25A45Q8N413 288 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 ZSCAN4Q8NAM6 433 aaPredicted RBP11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 OR2AE1Q8NHA4 323 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 SLC22A8Q8TCC7 542 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 SCGB3A2Q96PL1 93 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 FLVCR1Q9Y5Y0 555 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 A0A1B0GTI1 187 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 MASP2O00187 686 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 LRP3O75074 770 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 RAD51DO75771 328 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 RCC1P18754 421 aaPredicted RBP11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 CD80P33681 288 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 DCDP81605 110 aaKnown RBP11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 SRSF3P84103 164 aaKnown RBP11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 PCK2Q16822 640 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 GUSBP11Q6P575 273 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 C1QL2Q7Z5L3 287 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 RRNAD1Q96FB5 475 aaKnown RBP11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 UQCC2Q9BRT2 126 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 MED9Q9NWA0 146 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 MEMO1Q9Y316 297 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 WIF1Q9Y5W5 379 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 PI4KAP42356 2102 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 TMEM218A2RU14 115 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 EFNA2O43921 213 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 IFNA21P01568 189 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 CFIP05156 583 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 PNLIPP16233 465 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 CCNOP22674 350 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 AFF3P51826 1226 aaKnown RBP11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 MOB3CQ70IA8 216 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 SULF2Q8IWU5 870 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 DTWD2Q8NBA8 298 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 NUBPLQ8TB37 319 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 MR1Q95460 341 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 PIK3IP1Q96FE7 263 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 ZNF2Q9BSG1 426 aaPredicted RBP11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 C5orf66Q9H5L9 145 aa11.39□□□□□ -0.59
HMGCS1-201ENST00000325110 CCDC163A0A0D9SF12 145 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 LDLRAD4O15165 306 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 ZNHIT1O43257 154 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 PATE4P0C8F1 98 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 ANOS1P23352 680 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 PPT1P50897 306 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 MTCP1P56278 107 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 PHLDA2Q53GA4 152 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 RPL7L1Q6DKI1 246 aaKnown RBP11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 DRAM2Q6UX65 266 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 DKKL1Q9UK85 242 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 A0A0A6YYD4 124 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 DNASE2O00115 360 aaPredicted RBP11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 BET1O15155 118 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 SPRY1O43609 319 aaPredicted RBP11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 ACTL6AO96019 429 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 LCATP04180 440 aa11.38□□□□□ -0.59
HMGCS1-201ENST00000325110 ID4P47928 161 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms