RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PIGLQ9Y2B2 252 aa6.63□□□□□ -1.35
IFT88-201ENST00000319980 ZNF780AO75290 641 aaPredicted RBP6.63□□□□□ -1.35
IFT88-201ENST00000319980 MRPL33O75394 65 aaKnown RBP6.63□□□□□ -1.35
IFT88-201ENST00000319980 CRTAPO75718 401 aaPredicted RBP6.63□□□□□ -1.35
IFT88-201ENST00000319980 IGLV3-1P01715 115 aa6.63□□□□□ -1.35
IFT88-201ENST00000319980 DNASE1P24855 282 aa6.63□□□□□ -1.35
IFT88-201ENST00000319980 LHX2P50458 406 aa6.63□□□□□ -1.35
IFT88-201ENST00000319980 UBE2MP61081 183 aaKnown RBP6.63□□□□□ -1.35
IFT88-201ENST00000319980 UBE2V2Q15819 145 aa6.63□□□□□ -1.35
IFT88-201ENST00000319980 NDUFA5Q16718 116 aa6.63□□□□□ -1.35
IFT88-201ENST00000319980 ZNF626Q68DY1 528 aa6.63□□□□□ -1.35
IFT88-201ENST00000319980 OR52W1Q6IF63 320 aa6.63□□□□□ -1.35
IFT88-201ENST00000319980 TRAPPC6BQ86SZ2 158 aa6.63□□□□□ -1.35
IFT88-201ENST00000319980 C9orf62Q8N4C0 152 aa6.63□□□□□ -1.35
IFT88-201ENST00000319980 TMEM251Q8N6I4 163 aa6.63□□□□□ -1.35
IFT88-201ENST00000319980 OR10R2Q8NGX6 335 aa6.63□□□□□ -1.35
IFT88-201ENST00000319980 KCNG3Q8TAE7 436 aa6.63□□□□□ -1.35
IFT88-201ENST00000319980 C1orf147Q96MC9 270 aaPredicted RBP6.63□□□□□ -1.35
IFT88-201ENST00000319980 LPAR5Q9H1C0 372 aa6.63□□□□□ -1.35
IFT88-201ENST00000319980 NOSIPQ9Y314 301 aaKnown RBP6.63□□□□□ -1.35
IFT88-201ENST00000319980 OTOGLQ3ZCN5 2332 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 LOC100509620A0A075B734 347 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 TMEM238LA0A1B0GVL6 79 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 LINC01387J3KSC0 135 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 SOCS1O15524 211 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 SYNGR3O43761 229 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 MTRF1O75570 445 aaKnown RBP6.62□□□□□ -1.35
IFT88-201ENST00000319980 LCATP04180 440 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 ITGB2P05107 769 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 IL5P05113 134 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 HPNP05981 417 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 CST2P09228 141 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 CPN1P15169 458 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 MECP2P51608 486 aaKnown RBP6.62□□□□□ -1.35
IFT88-201ENST00000319980 PSG4Q00888 419 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 SCRN3Q0VDG4 424 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 RAB35Q15286 201 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 RIPPLY2Q5TAB7 128 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 TSPO2Q5TGU0 170 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 C9orf135Q5VTT2 229 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 NLRC3Q7RTR2 1065 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 SLC16A14Q7RTX9 510 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 SLC36A1Q7Z2H8 476 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 C1QL2Q7Z5L3 287 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 TMED4Q7Z7H5 227 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 BPIFB2Q8N4F0 458 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 PNLDC1Q8NA58 520 aaKnown RBP6.62□□□□□ -1.35
IFT88-201ENST00000319980 DEFB124Q8NES8 71 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 OR52H1Q8NGJ2 320 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 OR1F12Q8NHA8 337 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 FGFBP3Q8TAT2 258 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 SGK3Q96BR1 496 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 IP6K3Q96PC2 410 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 TMEM59Q9BXS4 323 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 OR10A2Q9H208 303 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 GPR35Q9HC97 309 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 SCP2D1Q9UJQ7 156 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 MED13Q9UHV7 2174 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 CFAP47Q6ZTR5 3102 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 UBE2QL1A1L167 161 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 ARGFXA6NJG6 315 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 SNRPGP15A8MWD9 76 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 CDC14BO60729 498 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 CRYGSP22914 178 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 HTR5AP47898 357 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 CLDN18P56856 261 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 HGFACQ04756 655 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 DRAM2Q6UX65 266 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 SEZ6L2Q6UXD5 910 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 SKA3Q8IX90 412 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 TUSC5Q8IXB3 177 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 OR10K1Q8NGX5 313 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 FNDC9Q8TBE3 224 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 PP6455Q8WZ26 134 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 PIGTQ969N2 578 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 PRRG4Q9BZD6 226 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 CALHM2Q9HA72 323 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 TMEM165Q9HC07 324 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 EIF3KQ9UBQ5 218 aaKnown RBP6.62□□□□□ -1.35
IFT88-201ENST00000319980 TIMM10BQ9Y5J6 103 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 V9GYS6 101 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 NCKAP5O14513 1909 aa6.62□□□□□ -1.35
IFT88-201ENST00000319980 A0A0A6YYD4 124 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 SPAARA0A1B0GVQ0 90 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 SCGNO76038 276 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 SP1P08047 785 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 CHRM2P08172 466 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 MELTFP08582 738 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 FCGR2AP12318 317 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 ACKR3P25106 362 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 PTGFRP43088 359 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 CXADRP78310 365 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 RNASE10Q5GAN6 216 aaKnown RBP6.61□□□□□ -1.35
IFT88-201ENST00000319980 PLAC9Q5JTB6 97 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 CDH26Q8IXH8 852 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 MUC20Q8N307 709 aaPredicted RBP6.61□□□□□ -1.35
IFT88-201ENST00000319980 RAB3CQ96E17 227 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 REEP6Q96HR9 211 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 CYYR1Q96J86 154 aa6.61□□□□□ -1.35
IFT88-201ENST00000319980 SLC6A7Q99884 636 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms