RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 DTWD2Q8NBA8 298 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 OR10A2Q9H208 303 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 CHRDQ9H2X0 955 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 ZNF160Q9HCG1 818 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 A0A1B0GTI1 187 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 OR6C76A6NM76 312 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 LRP3O75074 770 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 TMEM225BP0DP42 221 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 CX3CR1P49238 355 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 FXYD4P59646 89 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 ABCA11PQ4W5N1 156 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 LRRC18Q8N456 261 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 IFI44Q8TCB0 444 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 RNF133Q8WVZ7 376 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 PIGTQ969N2 578 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 SOX7Q9BT81 388 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 TLNRD1Q9H1K6 362 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 PLEKHJ1Q9NW61 149 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 C2orf16Q68DN1 1984 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 USP34Q70CQ2 3546 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 RALGAPA1Q6GYQ0 2036 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 GDF9O60383 454 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 IGFBP3P17936 291 aaPredicted RBP9.33□□□□□ -0.92
COL3A1-202ENST00000317840 GALNSP34059 522 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 APOBEC1P41238 236 aaKnown RBP9.33□□□□□ -0.92
COL3A1-202ENST00000317840 DCDP81605 110 aaKnown RBP9.33□□□□□ -0.92
COL3A1-202ENST00000317840 PEA15Q15121 130 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 DEGS2Q6QHC5 323 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 UQCC3Q6UW78 93 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 CLEC18BQ6UXF7 455 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 ZNF813Q6ZN06 617 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 OR10Z1Q8NGY1 313 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 OR51F2Q8NH61 342 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 ST7LQ8TDW4 575 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 C12orf57Q99622 126 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 RBM24Q9BX46 236 aaKnown RBP9.33□□□□□ -0.92
COL3A1-202ENST00000317840 ARRDC1-AS1Q9H2J1 176 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 TAF9BQ9HBM6 251 aa9.33□□□□□ -0.92
COL3A1-202ENST00000317840 ZNF850A8MQ14 1090 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 MS4A18H0YCH9 400 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 K7EPK0 472 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 HIST1H1DP16402 221 aaKnown RBP9.32□□□□□ -0.92
COL3A1-202ENST00000317840 CSRP1P21291 193 aaKnown RBP9.32□□□□□ -0.92
COL3A1-202ENST00000317840 MYBPHQ13203 477 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 MS4A18Q3C1V0 323 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 FAM71E2Q8N5Q1 922 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 MFSD8Q8NHS3 518 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 FNDC9Q8TBE3 224 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 MVB12AQ96EY5 273 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 SULT4A1Q9BR01 284 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 MESP1Q9BRJ9 268 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 UQCC2Q9BRT2 126 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 EIF5A2Q9GZV4 153 aaKnown RBP9.32□□□□□ -0.92
COL3A1-202ENST00000317840 RHOFQ9HBH0 211 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 RPS10P5Q9NQ39 176 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 BIN3Q9NQY0 253 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 B3GALT5Q9Y2C3 310 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 PCNX3Q9H6A9 2034 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 A0A1W2PQD3 144 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 RAB19A4D1S5 217 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 ACTL6AO96019 429 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 QDPRP09417 244 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 FCGR2AP12318 317 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.32□□□□□ -0.92
COL3A1-202ENST00000317840 LDLRAD3Q86YD5 345 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 SULF2Q8IWU5 870 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 ST8SIA1Q92185 356 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 CCDC74BQ96LY2 380 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 DUSP15Q9H1R2 295 aaPredicted RBP9.32□□□□□ -0.92
COL3A1-202ENST00000317840 NDRG3Q9UGV2 375 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 EDARQ9UNE0 448 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 SRPK3Q9UPE1 567 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 MPTX1A8MV57 137 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 TBPP20226 339 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 KRBOX4Q5JUW0 171 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 RAET1LQ5VY80 246 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 MISPQ8IVT2 679 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 SGPP2Q8IWX5 399 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 NUBPLQ8TB37 319 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 KLHL13Q9P2N7 655 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 C19orf25Q9UFG5 118 aaPredicted RBP9.32□□□□□ -0.92
COL3A1-202ENST00000317840 ZNF107Q9UII5 783 aaPredicted RBP9.32□□□□□ -0.92
COL3A1-202ENST00000317840 FLVCR1Q9Y5Y0 555 aa9.32□□□□□ -0.92
COL3A1-202ENST00000317840 ISG15P05161 165 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 CBR1P16152 277 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 NFYBP25208 207 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 RPL7L1Q6DKI1 246 aaKnown RBP9.31□□□□□ -0.92
COL3A1-202ENST00000317840 PAQR4Q8N4S7 273 aaPredicted RBP9.31□□□□□ -0.92
COL3A1-202ENST00000317840 ARHGEF39Q8N4T4 335 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 ARRDC1Q8N5I2 433 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 ZSCAN4Q8NAM6 433 aaPredicted RBP9.31□□□□□ -0.92
COL3A1-202ENST00000317840 CD300LFQ8TDQ1 290 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 CMSS1Q9BQ75 279 aaKnown RBP9.31□□□□□ -0.92
COL3A1-202ENST00000317840 OR5AC2Q9NZP5 309 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 ZFHX2Q9C0A1 2572 aaPredicted RBP9.31□□□□□ -0.92
COL3A1-202ENST00000317840 MSGN1A6NI15 193 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 TTLL8A6PVC2 850 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 TSPAN15O95858 294 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 MELTFP08582 738 aa9.31□□□□□ -0.92
COL3A1-202ENST00000317840 DUSP3P51452 185 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms