RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 PRAMEF7Q5VXH5 474 aa10.46□□□□□ -0.73
LDLRAD3-201ENST00000315571 RPL22L1Q6P5R6 122 aaKnown RBP10.46□□□□□ -0.73
LDLRAD3-201ENST00000315571 ZNF880Q6PDB4 577 aa10.46□□□□□ -0.73
LDLRAD3-201ENST00000315571 ZSCAN4Q8NAM6 433 aaPredicted RBP10.46□□□□□ -0.73
LDLRAD3-201ENST00000315571 TFGQ92734 400 aaPredicted RBP10.46□□□□□ -0.73
LDLRAD3-201ENST00000315571 ZNF845Q96IR2 970 aaPredicted RBP10.46□□□□□ -0.73
LDLRAD3-201ENST00000315571 ADAD1Q96M93 576 aaKnown RBP10.46□□□□□ -0.73
LDLRAD3-201ENST00000315571 CIB3Q96Q77 187 aaPredicted RBP10.46□□□□□ -0.73
LDLRAD3-201ENST00000315571 ZNF281Q9Y2X9 895 aa10.46□□□□□ -0.73
LDLRAD3-201ENST00000315571 TRAV27A0A087WT01 109 aa10.46□□□□□ -0.74
LDLRAD3-201ENST00000315571 RAB27BO00194 218 aa10.46□□□□□ -0.74
LDLRAD3-201ENST00000315571 JTBO76095 146 aa10.46□□□□□ -0.74
LDLRAD3-201ENST00000315571 KNG1P01042 644 aa10.46□□□□□ -0.74
LDLRAD3-201ENST00000315571 TMEM182Q6ZP80 229 aaPredicted RBP10.46□□□□□ -0.74
LDLRAD3-201ENST00000315571 C1QL4Q86Z23 238 aa10.46□□□□□ -0.74
LDLRAD3-201ENST00000315571 MALSU1Q96EH3 234 aa10.46□□□□□ -0.74
LDLRAD3-201ENST00000315571 PARP11Q9NR21 331 aa10.46□□□□□ -0.74
LDLRAD3-201ENST00000315571 INPP5EQ9NRR6 644 aa10.46□□□□□ -0.74
LDLRAD3-201ENST00000315571 H0YL77 283 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 CFIP05156 583 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 FURINP09958 794 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 NXPH1P58417 271 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 GAGE1Q13065 139 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 RAB32Q13637 225 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 TMEM41BQ5BJD5 291 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 METRNLQ641Q3 311 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 ADAMTS17Q8TE56 1095 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 GRHL3Q8TE85 626 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 MS4A10Q96PG2 267 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 CNN2Q99439 309 aaKnown RBP10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 OR2J1Q9GZK6 312 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 SLC7A7Q9UM01 511 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 DCDC2BA2VCK2 349 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 PPP5D1E7EU14 171 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 CCKBRP32239 447 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 RAB11BQ15907 218 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 MST1LQ2TV78 715 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 LEG1Q6P5S2 330 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 NUP54Q7Z3B4 507 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 ANGPTL5Q86XS5 388 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 VRK2Q86Y07 508 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 DND1Q8IYX4 353 aaKnown RBP10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 OR5L2Q8NGL0 311 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 OR5AK2Q8NH90 309 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 TMEM106AQ96A25 262 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 ADGRG7Q96K78 797 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 GPR27Q9NS67 375 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 NSA2O95478 260 aaKnown RBP10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 HPRT1P00492 218 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 HLA-DQA2P01906 255 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 CALCBP10092 127 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 RPL12P30050 165 aaKnown RBP10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 SNCAP37840 140 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 RAB11AP62491 216 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 C1orf61Q13536 156 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 STAC2Q6ZMT1 411 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 DCXRQ7Z4W1 244 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 APCDD1LQ8NCL9 501 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 OR51F2Q8NH61 342 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 CCL4L1Q8NHW4 92 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 TVP23CQ96ET8 276 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 ZNF587Q96SQ5 575 aaPredicted RBP10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 ZNF430Q9H8G1 570 aaPredicted RBP10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 PNO1Q9NRX1 252 aaKnown RBP10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 TMED7Q9Y3B3 224 aa10.45□□□□□ -0.74
LDLRAD3-201ENST00000315571 NDUFS8O00217 210 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 AMBPP02760 352 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 FCGR3AP08637 254 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 FAM157CP0CG43 387 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 MPZP25189 248 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 NCBP2P52298 156 aaKnown RBP eCLIP10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 COL9A2Q14055 689 aaPredicted RBP10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 DMKNQ6E0U4 476 aaPredicted RBP10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 ZNF573Q86YE8 665 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 SLC35F2Q8IXU6 374 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 CMTM1Q8IZ96 169 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 ZNF709Q8N972 641 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 ZNF485Q8NCK3 441 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 ASB11Q8WXH4 323 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 PELI1Q96FA3 418 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 ZNF2Q9BSG1 426 aaPredicted RBP10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 NEUROD4Q9HD90 331 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 OR5AC2Q9NZP5 309 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 CKLFQ9UBR5 152 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 MRPS18CQ9Y3D5 142 aaKnown RBP10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 HS3ST3B1Q9Y662 390 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 C8orf89P0DMQ9 161 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 DPP4P27487 766 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 SULT1A2P50226 295 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 HGFACQ04756 655 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 OR1P1Q8NH06 330 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 LMX1AQ8TE12 382 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 OR5P2Q8WZ92 322 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 SEH1LQ96EE3 360 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 HIST1H2AAQ96QV6 131 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 VAMP8Q9BV40 100 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 ULBP3Q9BZM4 244 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 ZNF552Q9H707 407 aaPredicted RBP10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 TMEM74BQ9NUR3 256 aa10.44□□□□□ -0.74
LDLRAD3-201ENST00000315571 PILRBQ9UKJ0 227 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms