RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ANGPTL5Q86XS5 388 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 PDZD9Q8IXQ8 264 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 ZNF101Q8IZC7 436 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 OR5D14Q8NGL3 314 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 NABP1Q96AH0 204 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 PGAM5Q96HS1 289 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 NELFAQ9H3P2 528 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 LDAHQ9H6V9 325 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 MTFP1Q9UDX5 166 aa10.92□□□□□ -0.66
RNF4-201ENST00000314289 WIPF3A6NGB9 483 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 B3GALNT1O75752 331 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 GABRA1P14867 456 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 CPN1P15169 458 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 PPP3CBP16298 524 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 FKBP2P26885 142 aaKnown RBP10.91□□□□□ -0.66
RNF4-201ENST00000314289 OR3A4PP47883 348 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 RAC3P60763 192 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 DHODHQ02127 395 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 SRSF6Q13247 344 aaKnown RBP10.91□□□□□ -0.66
RNF4-201ENST00000314289 AWAT2Q6E213 333 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 PAQR4Q8N4S7 273 aaPredicted RBP10.91□□□□□ -0.66
RNF4-201ENST00000314289 NAXEQ8NCW5 288 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 OR1S1Q8NH92 325 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 OR2AE1Q8NHA4 323 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 TNFAIP8L1Q8WVP5 186 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 THRSPQ92748 146 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 NICN1Q9BSH3 213 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 SAV1Q9H4B6 383 aaPredicted RBP10.91□□□□□ -0.66
RNF4-201ENST00000314289 BANF2Q9H503 90 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 FLVCR1Q9Y5Y0 555 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 LOC102725191A0A1B0GVB3 256 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 HCKP08631 526 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 RAB3AP20336 220 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 ZNF93P35789 620 aaPredicted RBP10.91□□□□□ -0.66
RNF4-201ENST00000314289 MAGEA5P43359 124 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 STK11Q15831 433 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 ZNF239Q16600 458 aaKnown RBP10.91□□□□□ -0.66
RNF4-201ENST00000314289 RSPO1Q2MKA7 263 aaPredicted RBP10.91□□□□□ -0.66
RNF4-201ENST00000314289 FAM74A1Q5RGS3 127 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 DCAF12L2Q5VW00 463 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 H3F3CQ6NXT2 135 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 ARMC10Q8N2F6 343 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 NTNG2Q96CW9 530 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 NARS2Q96I59 477 aaKnown RBP10.91□□□□□ -0.66
RNF4-201ENST00000314289 SLC6A15Q9H2J7 730 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 OPN4Q9UHM6 478 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 CEP250Q9BV73 2442 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 DCHS1Q96JQ0 3298 aa10.91□□□□□ -0.66
RNF4-201ENST00000314289 SPAARA0A1B0GVQ0 90 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 RLN2P04090 185 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 FGF2P09038 288 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 OR1C1Q15619 314 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 TRIP6Q15654 476 aaKnown RBP10.9□□□□□ -0.66
RNF4-201ENST00000314289 SULF2Q8IWU5 870 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 GVQW1Q8N7I0 195 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 BOLLQ8N9W6 283 aaKnown RBP10.9□□□□□ -0.66
RNF4-201ENST00000314289 TMEM104Q8NE00 496 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 AKR7LQ8NHP1 331 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 TMEM54Q969K7 222 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 SEH1LQ96EE3 360 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 LOXL4Q96JB6 756 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 LYZL4Q96KX0 146 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 FOXD3Q9UJU5 478 aaPredicted RBP10.9□□□□□ -0.66
RNF4-201ENST00000314289 RHBDD3Q9Y3P4 386 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 RP1L1Q8IWN7 2480 aaPredicted RBP10.9□□□□□ -0.66
RNF4-201ENST00000314289 OR2A4O95047 310 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 NDUFB6O95139 128 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 VAMP5O95183 116 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 ZNF806P0C7X5 589 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 VSIG8P0DPA2 414 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 GNB3P16520 340 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 FAHP16930 419 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 SORDQ00796 357 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 NKPD1Q17RQ9 610 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 SNAI3Q3KNW1 292 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 OLFML2AQ68BL7 652 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 ZNF774Q6NX45 483 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 AAED1Q7RTV5 226 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 DEFB124Q8NES8 71 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 NUDCD2Q8WVJ2 157 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 OR2A7Q96R45 310 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 GPER1Q99527 375 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 TINAGL1Q9GZM7 467 aaPredicted RBP10.9□□□□□ -0.66
RNF4-201ENST00000314289 ARID1AO14497 2285 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 ZNF318Q5VUA4 2279 aa10.9□□□□□ -0.66
RNF4-201ENST00000314289 AKAP13Q12802 2813 aa10.9□□□□□ -0.67
RNF4-201ENST00000314289 MEGF11A6BM72 1044 aa10.9□□□□□ -0.67
RNF4-201ENST00000314289 F5H5P2 479 aa10.9□□□□□ -0.67
RNF4-201ENST00000314289 OR52W1Q6IF63 320 aa10.9□□□□□ -0.67
RNF4-201ENST00000314289 GALNTL5Q7Z4T8 443 aa10.9□□□□□ -0.67
RNF4-201ENST00000314289 LYPD6Q86Y78 171 aa10.9□□□□□ -0.67
RNF4-201ENST00000314289 GALNT16Q8N428 558 aa10.9□□□□□ -0.67
RNF4-201ENST00000314289 GJC3Q8NFK1 279 aa10.9□□□□□ -0.67
RNF4-201ENST00000314289 OR2M7Q8NG81 312 aa10.9□□□□□ -0.67
RNF4-201ENST00000314289 FGFBP3Q8TAT2 258 aa10.9□□□□□ -0.67
RNF4-201ENST00000314289 UTP23Q9BRU9 249 aaKnown RBP10.9□□□□□ -0.67
RNF4-201ENST00000314289 CHST6Q9GZX3 395 aa10.9□□□□□ -0.67
RNF4-201ENST00000314289 PCDHB16Q9NRJ7 776 aa10.9□□□□□ -0.67
RNF4-201ENST00000314289 FAM74A7A6NL05 159 aa10.89□□□□□ -0.67
RNF4-201ENST00000314289 GJE1A6NN92 205 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms