RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 SERPINA2P20848 420 aa16.04■□□□□ 0.16
SPSB4-201ENST00000310546 GLRA1P23415 457 aa16.04■□□□□ 0.16
SPSB4-201ENST00000310546 ZNF74Q16587 644 aa16.04■□□□□ 0.16
SPSB4-201ENST00000310546 TMEM52BQ4KMG9 183 aa16.04■□□□□ 0.16
SPSB4-201ENST00000310546 DEFB119Q8N690 84 aa16.04■□□□□ 0.16
SPSB4-201ENST00000310546 PMM1Q92871 262 aa16.04■□□□□ 0.16
SPSB4-201ENST00000310546 ERGIC1Q969X5 290 aa16.04■□□□□ 0.16
SPSB4-201ENST00000310546 CYYR1Q96J86 154 aa16.04■□□□□ 0.16
SPSB4-201ENST00000310546 PACRGQ96M98 296 aaPredicted RBP16.04■□□□□ 0.16
SPSB4-201ENST00000310546 CDCA3Q99618 268 aaPredicted RBP16.04■□□□□ 0.16
SPSB4-201ENST00000310546 PBDC1Q9BVG4 233 aa16.04■□□□□ 0.16
SPSB4-201ENST00000310546 HOXB2P14652 356 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 KIR2DL1P43626 348 aaPredicted RBP16.03■□□□□ 0.16
SPSB4-201ENST00000310546 TCEAL6Q6IPX3 200 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 DGAT2L6Q6ZPD8 337 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 OR4C3Q8NH37 302 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 SERINC2Q96SA4 455 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 G6PC3Q9BUM1 346 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 MRPL37Q9BZE1 423 aaKnown RBP16.03■□□□□ 0.16
SPSB4-201ENST00000310546 C19orf12Q9NSK7 152 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 MEMO1Q9Y316 297 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 EMC9Q9Y3B6 208 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 MTCH2Q9Y6C9 303 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 MEGF11A6BM72 1044 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 C2CD4DB7Z1M9 353 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 DANCRP0C864 163 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 CTHP32929 405 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 ERVFRD-1P60508 538 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 ELOBQ15370 118 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 COX15Q7KZN9 410 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 ZNF101Q8IZC7 436 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 COMMD1Q8N668 190 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 LCN9Q8WX39 176 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 WDR92Q96MX6 357 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 RAB11FIP5Q9BXF6 653 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 HDAC8Q9BY41 377 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 OR11A1Q9GZK7 315 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 HS3ST3B1Q9Y662 390 aa16.03■□□□□ 0.16
SPSB4-201ENST00000310546 A0A1W2PQU0 124 aa16.02■□□□□ 0.16
SPSB4-201ENST00000310546 C11orf98E9PRG8 122 aa16.02■□□□□ 0.16
SPSB4-201ENST00000310546 GMFGO60234 142 aa16.02■□□□□ 0.16
SPSB4-201ENST00000310546 NKX2-2O95096 273 aa16.02■□□□□ 0.16
SPSB4-201ENST00000310546 SLC2A1P11166 492 aa16.02■□□□□ 0.16
SPSB4-201ENST00000310546 S1PR1P21453 382 aa16.02■□□□□ 0.16
SPSB4-201ENST00000310546 GNALP38405 381 aa16.02■□□□□ 0.16
SPSB4-201ENST00000310546 RAB4BP61018 213 aa16.02■□□□□ 0.16
SPSB4-201ENST00000310546 ZNF542PQ5EBM4 170 aa16.02■□□□□ 0.16
SPSB4-201ENST00000310546 OPN5Q6U736 354 aa16.02■□□□□ 0.16
SPSB4-201ENST00000310546 ELSPBP1Q96BH3 223 aa16.02■□□□□ 0.16
SPSB4-201ENST00000310546 BSCL2Q96G97 398 aaPredicted RBP16.02■□□□□ 0.16
SPSB4-201ENST00000310546 LRIT1Q9P2V4 623 aa16.02■□□□□ 0.16
SPSB4-201ENST00000310546 WDFY3Q8IZQ1 3526 aa16.02■□□□□ 0.16
SPSB4-201ENST00000310546 METTL12A8MUP2 240 aa16.02■□□□□ 0.15
SPSB4-201ENST00000310546 SDCBPO00560 298 aaPredicted RBP16.02■□□□□ 0.15
SPSB4-201ENST00000310546 GAPDHP04406 335 aaKnown RBP16.02■□□□□ 0.15
SPSB4-201ENST00000310546 HEXBP07686 556 aa16.02■□□□□ 0.15
SPSB4-201ENST00000310546 IL2RGP31785 369 aa16.02■□□□□ 0.15
SPSB4-201ENST00000310546 PPP1CCP36873 323 aaKnown RBP16.02■□□□□ 0.15
SPSB4-201ENST00000310546 SLC35A1P78382 337 aa16.02■□□□□ 0.15
SPSB4-201ENST00000310546 HIST2H3PS2Q5TEC6 136 aa16.02■□□□□ 0.15
SPSB4-201ENST00000310546 SLC18B1Q6NT16 456 aa16.02■□□□□ 0.15
SPSB4-201ENST00000310546 ADAMTSL4Q6UY14 1074 aa16.02■□□□□ 0.15
SPSB4-201ENST00000310546 NICN1Q9BSH3 213 aa16.02■□□□□ 0.15
SPSB4-201ENST00000310546 SH3BGRL3Q9H299 93 aa16.02■□□□□ 0.15
SPSB4-201ENST00000310546 HHLA2Q9UM44 414 aa16.02■□□□□ 0.15
SPSB4-201ENST00000310546 MRPS2Q9Y399 296 aaKnown RBP16.02■□□□□ 0.15
SPSB4-201ENST00000310546 KDM8Q8N371 416 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 LRRC75AQ8NAA5 344 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 RTBDNQ9BSG5 229 aaPredicted RBP16.01■□□□□ 0.15
SPSB4-201ENST00000310546 BCO1Q9HAY6 547 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 MMP25Q9NPA2 562 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 CELSR3Q9NYQ7 3312 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 CABIN1Q9Y6J0 2220 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 LOC107986453A0A1B0GWG9 222 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 SMCO3A2RU48 225 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 GPR75O95800 540 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 NUTF2P61970 127 aaKnown RBP16.01■□□□□ 0.15
SPSB4-201ENST00000310546 ZNHIT3Q15649 155 aaPredicted RBP16.01■□□□□ 0.15
SPSB4-201ENST00000310546 FDX2Q6P4F2 183 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 POMZP3Q6PJE2 187 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 Q6ZS52 159 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 HSD17B11Q8NBQ5 300 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 NAXEQ8NCW5 288 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 RAB39BQ96DA2 213 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 MVB12AQ96EY5 273 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 SLCO1B1Q9Y6L6 691 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 H3BQ15 152 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 ZNF264O43296 627 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 PRKNO60260 465 aaPredicted RBP16.01■□□□□ 0.15
SPSB4-201ENST00000310546 HCKP08631 526 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 UBE2KP61086 200 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 MGAT2Q10469 447 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 IL15RAQ13261 267 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 SGCGQ13326 291 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 DTWD2Q8NBA8 298 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 OR52N4Q8NGI2 321 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 DUSP15Q9H1R2 295 aaPredicted RBP16.01■□□□□ 0.15
SPSB4-201ENST00000310546 ZDBF2Q9HCK1 2354 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 LRP12Q9Y561 859 aa16.01■□□□□ 0.15
SPSB4-201ENST00000310546 FREM3P0C091 2139 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms