RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 MRPL28Q13084 256 aaKnown RBP16.74■□□□□ 0.27
VEGFB-201ENST00000309422 TMEM155Q4W5P6 130 aa16.74■□□□□ 0.27
VEGFB-201ENST00000309422 ZBTB37Q5TC79 503 aa16.74■□□□□ 0.27
VEGFB-201ENST00000309422 PRAMEF6Q5VXH4 476 aa16.74■□□□□ 0.27
VEGFB-201ENST00000309422 DOK3Q7L591 496 aa16.74■□□□□ 0.27
VEGFB-201ENST00000309422 SSX6Q7RTT6 188 aa16.74■□□□□ 0.27
VEGFB-201ENST00000309422 ZNF420Q8TAQ5 688 aaPredicted RBP16.74■□□□□ 0.27
VEGFB-201ENST00000309422 HAVCR2Q8TDQ0 301 aa16.74■□□□□ 0.27
VEGFB-201ENST00000309422 PIGCQ92535 297 aa16.74■□□□□ 0.27
VEGFB-201ENST00000309422 DVL3Q92997 716 aaPredicted RBP16.74■□□□□ 0.27
VEGFB-201ENST00000309422 LGALS12Q96DT0 336 aa16.74■□□□□ 0.27
VEGFB-201ENST00000309422 ACOXLQ9NUZ1 547 aa16.74■□□□□ 0.27
VEGFB-201ENST00000309422 ZNF319Q9P2F9 582 aa16.74■□□□□ 0.27
VEGFB-201ENST00000309422 TMEM210A6NLX4 147 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 PRR32B1ATL7 298 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 TMEM178BH3BS89 294 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 CST4P01036 141 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 GABRB1P18505 474 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 PRDX4Q13162 271 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 TP53I3Q53FA7 332 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 NLRC3Q7RTR2 1065 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 ELMOD2Q8IZ81 293 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 Q8TCH9 128 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 MSI2Q96DH6 328 aaKnown RBP16.73■□□□□ 0.27
VEGFB-201ENST00000309422 ALG8Q9BVK2 526 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 AMBNQ9NP70 447 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 RNF7Q9UBF6 113 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 LPAR3Q9UBY5 353 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 PIGLQ9Y2B2 252 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 EXOGQ9Y2C4 368 aaKnown RBP16.73■□□□□ 0.27
VEGFB-201ENST00000309422 RHBDD3Q9Y3P4 386 aa16.73■□□□□ 0.27
VEGFB-201ENST00000309422 RTTNQ86VV8 2226 aa16.72■□□□□ 0.27
VEGFB-201ENST00000309422 PPIAL4EA0A075B759 164 aa16.72■□□□□ 0.27
VEGFB-201ENST00000309422 ZNF850A8MQ14 1090 aa16.72■□□□□ 0.27
VEGFB-201ENST00000309422 INAFM1C9JVW0 142 aa16.72■□□□□ 0.27
VEGFB-201ENST00000309422 PPIAL4DF5H284 164 aa16.72■□□□□ 0.27
VEGFB-201ENST00000309422 MAGEB4O15481 346 aaPredicted RBP16.72■□□□□ 0.27
VEGFB-201ENST00000309422 SYT7O43581 403 aa16.72■□□□□ 0.27
VEGFB-201ENST00000309422 LMX1BO60663 402 aa16.72■□□□□ 0.27
VEGFB-201ENST00000309422 CYB5R3P00387 301 aaPredicted RBP16.72■□□□□ 0.27
VEGFB-201ENST00000309422 RPSAP08865 295 aaKnown RBP16.72■□□□□ 0.27
VEGFB-201ENST00000309422 HTR1AP08908 422 aa16.72■□□□□ 0.27
VEGFB-201ENST00000309422 PPIAL4FP0DN26 164 aa16.72■□□□□ 0.27
VEGFB-201ENST00000309422 MAB21L1Q13394 359 aa16.72■□□□□ 0.27
VEGFB-201ENST00000309422 SPRNQ5BIV9 151 aa16.72■□□□□ 0.27
VEGFB-201ENST00000309422 C1orf123Q9NWV4 160 aa16.72■□□□□ 0.27
VEGFB-201ENST00000309422 AASSQ9UDR5 926 aa16.72■□□□□ 0.27
VEGFB-201ENST00000309422 PPIAL4AQ9Y536 164 aa16.72■□□□□ 0.27
VEGFB-201ENST00000309422 DHRS7CA6NNS2 312 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 J3QLW9 94 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 FAM20BO75063 409 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 IGHV2-70P01814 119 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 TTRP02766 147 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 MSMBP08118 114 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 ZNF19P17023 458 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 ANOS1P23352 680 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 ZNF85Q03923 595 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 CDONQ4KMG0 1287 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 ZNF684Q5T5D7 378 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 PLCXD3Q63HM9 321 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 TEX29Q8N6K0 151 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 LYZL4Q96KX0 146 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 C4orf36Q96KX1 117 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 SHARPINQ9H0F6 387 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 LPAR2Q9HBW0 351 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 CDC42EP3Q9UKI2 254 aa16.71■□□□□ 0.27
VEGFB-201ENST00000309422 P2RY10O00398 339 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 CLIC3O95833 236 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 PNPP00491 289 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 SERPINA3P01011 423 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 IGHV2-5P01817 119 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 RPS2P15880 293 aaKnown RBP16.7■□□□□ 0.26
VEGFB-201ENST00000309422 CPT2P23786 658 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 ACKR3P25106 362 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 IL2RGP31785 369 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 KRTAP1-1Q07627 177 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 GALEQ14376 348 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 ODF4Q2M2E3 257 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 ESCO2Q56NI9 601 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 TMPRSS11AQ6ZMR5 421 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 CATSPERDQ86XM0 798 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 EGFL6Q8IUX8 553 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 BOLLQ8N9W6 283 aaKnown RBP16.7■□□□□ 0.26
VEGFB-201ENST00000309422 CNIH3Q8TBE1 160 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 G6PC2Q9NQR9 355 aa16.7■□□□□ 0.26
VEGFB-201ENST00000309422 ACANP16112 2415 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 TRAV20A0A0B4J274 112 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 OR5B21A6NL26 309 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 DLGAP1O14490 977 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 SRSF10O75494 262 aaKnown RBP16.69■□□□□ 0.26
VEGFB-201ENST00000309422 FOXH1O75593 365 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 GATBO75879 557 aaKnown RBP16.69■□□□□ 0.26
VEGFB-201ENST00000309422 PTBP3O95758 552 aaKnown RBP16.69■□□□□ 0.26
VEGFB-201ENST00000309422 OCM2P0CE71 109 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 OCMP0CE72 109 aaPredicted RBP16.69■□□□□ 0.26
VEGFB-201ENST00000309422 DCKP27707 260 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 DVL1P1P54792 670 aaPredicted RBP16.69■□□□□ 0.26
VEGFB-201ENST00000309422 GNG3P63215 75 aa16.69■□□□□ 0.26
VEGFB-201ENST00000309422 ADARB1P78563 741 aaKnown RBP16.69■□□□□ 0.26
VEGFB-201ENST00000309422 CHRFAM7AQ494W8 412 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms