RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 PPP4R1LQ9P1A2 415 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 MEMO1Q9Y316 297 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 A6NIZ1 184 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 NUDT21O43809 227 aaKnown RBP13.14□□□□□ -0.31
RUNX3-201ENST00000308873 ANGPTL7O43827 346 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 RAD51DO75771 328 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 IFNA21P01568 189 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 CLPSP04118 112 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 OR8U9P0C7N5 309 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 FCGR2AP12318 317 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 IGFBP3P17936 291 aaPredicted RBP13.14□□□□□ -0.31
RUNX3-201ENST00000308873 FHITP49789 147 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 RAP1BP61224 184 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 RAP1AP62834 184 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 ABCA11PQ4W5N1 156 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 OR8U1Q8NH10 309 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 KCNG3Q8TAE7 436 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 ST7LQ8TDW4 575 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 ADIPOR1Q96A54 375 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 CCNL2Q96S94 520 aaPredicted RBP13.14□□□□□ -0.31
RUNX3-201ENST00000308873 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.14□□□□□ -0.31
RUNX3-201ENST00000308873 PCDHGA1Q9Y5H4 931 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 PUS1Q9Y606 427 aaKnown RBP eCLIP13.14□□□□□ -0.31
RUNX3-201ENST00000308873 hCG_1809904A0A1W2PP81 198 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 A0A1W2PR64 198 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 A0A1W2PRV1 198 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 ADAM10O14672 748 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 HIST1H1DP16402 221 aaKnown RBP13.14□□□□□ -0.31
RUNX3-201ENST00000308873 RPL12P30050 165 aaKnown RBP13.14□□□□□ -0.31
RUNX3-201ENST00000308873 HOXA1P49639 335 aaPredicted RBP13.14□□□□□ -0.31
RUNX3-201ENST00000308873 MEX3BQ6ZN04 569 aaKnown RBP13.14□□□□□ -0.31
RUNX3-201ENST00000308873 C6orf201Q7Z4U5 140 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 GLYATL2Q8WU03 294 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 ZDHHC12Q96GR4 267 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 LPAR5Q9H1C0 372 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 SPACA1Q9HBV2 294 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 SDHAF3Q9NRP4 125 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 LANCL2Q9NS86 450 aa13.14□□□□□ -0.31
RUNX3-201ENST00000308873 NDUFA2O43678 99 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 EIF3GO75821 320 aaKnown RBP eCLIP13.13□□□□□ -0.31
RUNX3-201ENST00000308873 DXOO77932 396 aaKnown RBP13.13□□□□□ -0.31
RUNX3-201ENST00000308873 FAHP16930 419 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 IGSF11Q5DX21 431 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 KIAA0895LQ68EN5 471 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 SULF2Q8IWU5 870 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 SUMF1Q8NBK3 374 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 PHOSPHO2Q8TCD6 241 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 LIPHQ8WWY8 451 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 HOXB13Q92826 284 aaPredicted RBP13.13□□□□□ -0.31
RUNX3-201ENST00000308873 ZNF2Q9BSG1 426 aaPredicted RBP13.13□□□□□ -0.31
RUNX3-201ENST00000308873 VN1R1Q9GZP7 353 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 OR10A2Q9H208 303 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 FAM230AA0A1W2PPH8 454 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 A6NLC8 198 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 MS4A18H0YCH9 400 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 PET100P0DJ07 73 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 NQO2P16083 231 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 CX3CR1P49238 355 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 RRADP55042 308 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 MS4A18Q3C1V0 323 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 EDEM2Q9BV94 578 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 HS3ST3A1Q9Y663 406 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 C5orf67F2Z3F1 127 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 SFT2D2O95562 160 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 BPNT1O95861 308 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 HOXC4P09017 264 aaPredicted RBP13.13□□□□□ -0.31
RUNX3-201ENST00000308873 FOLR1P15328 257 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 ZNF43P17038 809 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 GABREP78334 506 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 TMEM176BQ3YBM2 270 aaPredicted RBP13.13□□□□□ -0.31
RUNX3-201ENST00000308873 CPEB2Q7Z5Q1 589 aaKnown RBP13.13□□□□□ -0.31
RUNX3-201ENST00000308873 RBM24Q9BX46 236 aaKnown RBP13.13□□□□□ -0.31
RUNX3-201ENST00000308873 ZNF700Q9H0M5 742 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 FBXL17Q9UF56 701 aa13.13□□□□□ -0.31
RUNX3-201ENST00000308873 NXT1Q9UKK6 140 aaKnown RBP13.13□□□□□ -0.31
RUNX3-201ENST00000308873 ARPC4-TTLL3A0A0A6YYG9 625 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 IGHV3-15A0A0B4J1V0 119 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 HSPB2A8KAH6 182 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 CDC14BO60729 498 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 JMJD7P0C870 316 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 CSNK1EP49674 416 aaKnown RBP13.12□□□□□ -0.31
RUNX3-201ENST00000308873 HSPB2Q16082 182 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 EIF2S3LQ2VIR3 472 aaKnown RBP13.12□□□□□ -0.31
RUNX3-201ENST00000308873 C1orf100Q5SVJ3 147 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 C1QL2Q7Z5L3 287 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 GKN2Q86XP6 184 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 FAM24BQ8N5W8 94 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 OR8B12Q8NGG6 310 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 OR1L3Q8NH93 324 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 ASB13Q8WXK3 278 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 KIRREL1Q96J84 757 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 WIF1Q9Y5W5 379 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 URGCP-MRPS24S4R325 110 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 TLCD2A6NGC4 264 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 CSTBP04080 98 aaKnown RBP13.12□□□□□ -0.31
RUNX3-201ENST00000308873 TAF9Q16594 264 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 FDX2Q6P4F2 183 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 ASB10Q8WXI3 467 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 DDIT4LQ96D03 193 aa13.12□□□□□ -0.31
RUNX3-201ENST00000308873 ZNF160Q9HCG1 818 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms