RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 PET117Q6UWS5 81 aa9.4□□□□□ -0.91
CLIP1-201ENST00000302528 TIPARPQ7Z3E1 657 aaKnown RBP9.4□□□□□ -0.91
CLIP1-201ENST00000302528 TGIF2LYQ8IUE0 185 aa9.4□□□□□ -0.91
CLIP1-201ENST00000302528 GALNT16Q8N428 558 aa9.4□□□□□ -0.91
CLIP1-201ENST00000302528 OR10V1Q8NGI7 309 aa9.4□□□□□ -0.91
CLIP1-201ENST00000302528 MS4A10Q96PG2 267 aa9.4□□□□□ -0.91
CLIP1-201ENST00000302528 OR51B4Q9Y5P0 310 aa9.4□□□□□ -0.91
CLIP1-201ENST00000302528 ALS2Q96Q42 1657 aa9.4□□□□□ -0.91
CLIP1-201ENST00000302528 SERPINE3A8MV23 424 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 EDIL3O43854 480 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 SLC2A10O95528 541 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 B3GALT4O96024 378 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 CD3DP04234 171 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 GABRB1P18505 474 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 CEBPDP49716 269 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-201ENST00000302528 GNG10P50151 68 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 RBPMS2Q6ZRY4 209 aaKnown RBP9.39□□□□□ -0.91
CLIP1-201ENST00000302528 PLPP6Q8IY26 295 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 OR10D4PQ8NGN7 298 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 OXGR1Q96P68 337 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 HDAC8Q9BY41 377 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 CLEC1BQ9P126 229 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 HTN1P15515 57 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 KIR2DL1P43626 348 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-201ENST00000302528 KIR2DL2P43627 348 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-201ENST00000302528 ASAH1Q13510 395 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 SYT14P1Q58G82 188 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 FFAR4Q5NUL3 377 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 FNDC7Q5VTL7 733 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 SLC36A1Q7Z2H8 476 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 ARFGAP1Q8N6T3 406 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 ARIH2OSQ8N7S6 290 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 BCORP1Q8N888 145 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 SLC45A2Q9UMX9 530 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 TRPM3Q9HCF6 1732 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-201ENST00000302528 IGHV3-15A0A0B4J1V0 119 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 TMEM30CPA0ZSE6 113 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 UQCRFS1P47985 274 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 RPEL1Q2QD12 228 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 OR52N4Q8NGI2 321 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 HINT3Q9NQE9 182 aaKnown RBP9.39□□□□□ -0.91
CLIP1-201ENST00000302528 UQCC1Q9NVA1 299 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 TNFSF11O14788 317 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 KRASP01116 189 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 OPN1MWP04001 364 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 OPN1MW2P0DN77 364 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 OPN1MW3P0DN78 364 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 KCNAB1Q14722 419 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 PLA1AQ53H76 456 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 GFRALQ6UXV0 394 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 OR1L1Q8NH94 360 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 PLPPR2Q96GM1 343 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 IL21Q9HBE4 155 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 OCIAD1Q9NX40 245 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 ZNF391Q9UJN7 358 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 FLVCR2Q9UPI3 526 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 R4GMQ9 66 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 MYH11P35749 1972 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 IDSB3KWA1 339 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 HRASP01112 189 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 TFAP2AP05549 437 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 KCNJ3P48549 501 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 EGR3Q06889 387 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 B3GNT9Q6UX72 402 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 OR6S1Q8NH40 331 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 SEBOXQ9HB31 216 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-201ENST00000302528 MYOZ1Q9NP98 299 aaPredicted RBP9.39□□□□□ -0.91
CLIP1-201ENST00000302528 THYN1Q9P016 225 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 HS3ST3A1Q9Y663 406 aa9.39□□□□□ -0.91
CLIP1-201ENST00000302528 TMEM265A0A087WTH1 108 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 SFTA3P0C7M3 94 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 CAMPP49913 170 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 OR4C16Q8NGL9 310 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 TNFRSF19Q9NS68 423 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 IGKV6-21A0A0C4DH24 114 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 BCL2L11O43521 198 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 TMPRSS11DO60235 418 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 B4GALT1P15291 398 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 ASCL1P50553 236 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 ADIPOQQ15848 244 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 SPATA46Q5T0L3 261 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 C5orf17Q8NAS9 161 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 MIEN1Q9BRT3 115 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 SEC11CQ9BY50 192 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 NAV1Q8NEY1 1877 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 CSN3P07498 182 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 CD22P20273 847 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 GCSHP23434 173 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 HLXQ14774 488 aaPredicted RBP9.38□□□□□ -0.91
CLIP1-201ENST00000302528 FAM71E1Q6IPT2 247 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 PPP1R1CQ8WVI7 109 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 MRPL37Q9BZE1 423 aaKnown RBP9.38□□□□□ -0.91
CLIP1-201ENST00000302528 KIR3DX1Q9H7L2 352 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 MYO5AQ9Y4I1 1855 aaKnown RBP9.38□□□□□ -0.91
CLIP1-201ENST00000302528 TRAV20A0A0B4J274 112 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 TMEM189-UBE2V1I3L0A0 370 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 MELTFP08582 738 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 RFLNAQ6ZTI6 216 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 USP54Q70EL1 1684 aa9.38□□□□□ -0.91
CLIP1-201ENST00000302528 CCDC190Q86UF4 302 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms