RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ROBO4Q8WZ75 1007 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 HGDQ93099 445 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 ZNF845Q96IR2 970 aaPredicted RBP12.53□□□□□ -0.4
SDC2-201ENST00000302190 SARGQ9BW04 601 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 MIOXQ9UGB7 285 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 TINAGQ9UJW2 476 aa12.53□□□□□ -0.4
SDC2-201ENST00000302190 PUS1Q9Y606 427 aaKnown RBP eCLIP12.53□□□□□ -0.4
SDC2-201ENST00000302190 ABCD4O14678 606 aa12.52□□□□□ -0.4
SDC2-201ENST00000302190 SOCS1O15524 211 aa12.52□□□□□ -0.4
SDC2-201ENST00000302190 NME2P1O60361 137 aa12.52□□□□□ -0.4
SDC2-201ENST00000302190 FUT7Q11130 342 aa12.52□□□□□ -0.4
SDC2-201ENST00000302190 PPA1Q15181 289 aa12.52□□□□□ -0.4
SDC2-201ENST00000302190 STPG1Q5TH74 334 aa12.52□□□□□ -0.4
SDC2-201ENST00000302190 LYG2Q86SG7 212 aa12.52□□□□□ -0.4
SDC2-201ENST00000302190 PPP1R3BQ86XI6 285 aa12.52□□□□□ -0.4
SDC2-201ENST00000302190 SLC26A10Q8NG04 563 aa12.52□□□□□ -0.4
SDC2-201ENST00000302190 OR56B1Q8NGI3 324 aa12.52□□□□□ -0.4
SDC2-201ENST00000302190 OR2I1PQ8NGU4 316 aa12.52□□□□□ -0.4
SDC2-201ENST00000302190 MAFAQ8NHW3 353 aaPredicted RBP12.52□□□□□ -0.4
SDC2-201ENST00000302190 PFDN5Q99471 154 aa12.52□□□□□ -0.4
SDC2-201ENST00000302190 REG4Q9BYZ8 158 aa12.52□□□□□ -0.4
SDC2-201ENST00000302190 RTN4RQ9BZR6 473 aa12.52□□□□□ -0.4
SDC2-201ENST00000302190 KLF2Q9Y5W3 355 aaPredicted RBP12.52□□□□□ -0.4
SDC2-201ENST00000302190 C1orf196B1AJZ1 125 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 EDN3P14138 238 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 RPS4XP62701 263 aaKnown RBP12.52□□□□□ -0.41
SDC2-201ENST00000302190 MFAP5Q13361 173 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 C21orf62-AS1Q17RA5 79 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 SPICQ8N5J4 248 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 SGCZQ96LD1 299 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 MGMTP16455 207 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 CNR1P21554 472 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 RPS4Y1P22090 263 aaKnown RBP12.52□□□□□ -0.41
SDC2-201ENST00000302190 PDZK1IP1Q13113 114 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 GNMTQ14749 295 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 CEBPEQ15744 281 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 NHLRC3Q5JS37 347 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 YRDCQ86U90 279 aaKnown RBP12.52□□□□□ -0.41
SDC2-201ENST00000302190 C9orf40Q8IXQ3 194 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 NKAIN3Q8N8D7 197 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 OR1N1Q8NGS0 311 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 OR2AE1Q8NHA4 323 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 RNF141Q8WVD5 230 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 CHRDQ9H2X0 955 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 ZCCHC4Q9H5U6 513 aa12.52□□□□□ -0.41
SDC2-201ENST00000302190 BORCS7-ASMTA0A0B4J1R7 106 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 LOC101059948A0A1B0GTJ6 334 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 HSD17B13Q7Z5P4 300 aaPredicted RBP12.51□□□□□ -0.41
SDC2-201ENST00000302190 TIMP4Q99727 224 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 ZNF2Q9BSG1 426 aaPredicted RBP12.51□□□□□ -0.41
SDC2-201ENST00000302190 SLCO5A1Q9H2Y9 848 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 SLC7A11Q9UPY5 501 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 A8MXK9 166 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 PLPP3O14495 311 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 SPRY1O43609 319 aaPredicted RBP12.51□□□□□ -0.41
SDC2-201ENST00000302190 FAM157BP0CG42 384 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 FOXK1P85037 733 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 PEA15Q15121 130 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.51□□□□□ -0.41
SDC2-201ENST00000302190 PLEKHN1Q494U1 663 aaPredicted RBP12.51□□□□□ -0.41
SDC2-201ENST00000302190 ADAM5Q6NVV9 412 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 BAP18Q8IXM2 172 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 OR5T1Q8NG75 326 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 SECTM1Q8WVN6 248 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 ADAT3Q96EY9 351 aaPredicted RBP12.51□□□□□ -0.41
SDC2-201ENST00000302190 ZNF251Q9BRH9 671 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 ZNF629Q9UEG4 869 aaPredicted RBP12.51□□□□□ -0.41
SDC2-201ENST00000302190 BLACEA4D250 179 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 CTDSPLO15194 276 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 GATCO43716 136 aaKnown RBP12.51□□□□□ -0.41
SDC2-201ENST00000302190 S100PP25815 95 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 HTR5AP47898 357 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 TAS2R31P59538 309 aa12.51□□□□□ -0.41
SDC2-201ENST00000302190 PRRC2CQ9Y520 2896 aaKnown RBP12.51□□□□□ -0.41
SDC2-201ENST00000302190 DIDO1Q9BTC0 2240 aaKnown RBP12.5□□□□□ -0.41
SDC2-201ENST00000302190 PLSCR5A0PG75 271 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 ST8SIA5O15466 376 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 TUBG1P23258 451 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 PNLIPRP2P54317 469 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 DCDP81605 110 aaKnown RBP12.5□□□□□ -0.41
SDC2-201ENST00000302190 PCK2Q16822 640 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 VASH2Q86V25 355 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 SRPK3Q9UPE1 567 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 URGCP-MRPS24S4R325 110 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 PI4KAP42356 2102 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 LAMA5O15230 3695 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 ALG1L2C9J202 215 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 E9PQ18 207 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 LRP3O75074 770 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 EIF3GO75821 320 aaKnown RBP eCLIP12.5□□□□□ -0.41
SDC2-201ENST00000302190 OR2F2O95006 317 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 IFNA4P05014 189 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 ASAH2BP0C7U1 165 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 SRFP11831 508 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 OR2F1Q13607 317 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 FAM189A2Q15884 450 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 ZNF124Q15973 351 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 BEND4Q6ZU67 534 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 NUBPLQ8TB37 319 aa12.5□□□□□ -0.41
SDC2-201ENST00000302190 FAM213BQ8TBF2 198 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms