RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 UPB1Q9UBR1 384 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 NAP1L6A6NFF2 107 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 PSMB1P20618 241 aaKnown RBP18.61■□□□□ 0.57
SOX17-201ENST00000297316 OR3A4PP47883 348 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 ST3GAL2Q16842 350 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 IGFL3Q6UXB1 125 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 ANGPTL5Q86XS5 388 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 SPACA3Q8IXA5 215 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 GCNT2Q8N0V5 402 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 OR4C16Q8NGL9 310 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 OR1F12Q8NHA8 337 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 SEH1LQ96EE3 360 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 OR2H1Q9GZK4 316 aa18.61■□□□□ 0.57
SOX17-201ENST00000297316 PIEZO2Q9H5I5 2752 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 A0A0U1RQV5 110 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 ZNF503-AS2A6NEH8 195 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 ZNF587BE7ETH6 402 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 ERVH48-1M5A8F1 160 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 HTR2BP41595 481 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 PRSS12P56730 875 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 GNG2P59768 71 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 AWAT2Q6E213 333 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 CRIP3Q6Q6R5 217 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 OR56B4Q8NH76 319 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 SSC4DQ8WTU2 575 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 PTX4Q96A99 478 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 CYYR1Q96J86 154 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 C1orf147Q96MC9 270 aaPredicted RBP18.6■□□□□ 0.57
SOX17-201ENST00000297316 V9GYS6 101 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 RAB27BO00194 218 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 BPNT1O95861 308 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 MMP7P09237 267 aaPredicted RBP18.6■□□□□ 0.57
SOX17-201ENST00000297316 FAHP16930 419 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 RAB6AP20340 208 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 HTR5AP47898 357 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 VEGFCP49767 419 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 SCRN3Q0VDG4 424 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 LAMTOR1Q6IAA8 161 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 PGAP1Q75T13 922 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 RBMXL3Q8N7X1 1067 aaKnown RBP18.6■□□□□ 0.57
SOX17-201ENST00000297316 OR11H7Q8NGC8 314 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 OR2AE1Q8NHA4 323 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 DVL3Q92997 716 aaPredicted RBP18.6■□□□□ 0.57
SOX17-201ENST00000297316 SPTSSAQ969W0 71 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 TRIB1Q96RU8 372 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 OR51J1Q9H342 316 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 RAB22AQ9UL26 194 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 TIMM10BQ9Y5J6 103 aa18.6■□□□□ 0.57
SOX17-201ENST00000297316 TMEM235A6NFC5 223 aa18.59■□□□□ 0.57
SOX17-201ENST00000297316 ARPC1BO15143 372 aaKnown RBP18.59■□□□□ 0.57
SOX17-201ENST00000297316 NPRL2Q8WTW4 380 aa18.59■□□□□ 0.57
SOX17-201ENST00000297316 SGK3Q96BR1 496 aa18.59■□□□□ 0.57
SOX17-201ENST00000297316 TRAF4Q9BUZ4 470 aaPredicted RBP18.59■□□□□ 0.57
SOX17-201ENST00000297316 MAP1BP46821 2468 aaKnown RBP18.59■□□□□ 0.57
SOX17-201ENST00000297316 OR6C6A6NF89 314 aa18.58■□□□□ 0.57
SOX17-201ENST00000297316 RPL36A-HNRNPH2H7BZ11 118 aa18.58■□□□□ 0.57
SOX17-201ENST00000297316 DHRS3O75911 302 aa18.58■□□□□ 0.57
SOX17-201ENST00000297316 HLA-HP01893 362 aa18.58■□□□□ 0.57
SOX17-201ENST00000297316 HPXP02790 462 aa18.58■□□□□ 0.57
SOX17-201ENST00000297316 ERCC1P07992 297 aaPredicted RBP18.58■□□□□ 0.57
SOX17-201ENST00000297316 HCKP08631 526 aa18.58■□□□□ 0.57
SOX17-201ENST00000297316 RAG2P55895 527 aa18.58■□□□□ 0.57
SOX17-201ENST00000297316 P4HA3Q7Z4N8 544 aa18.58■□□□□ 0.57
SOX17-201ENST00000297316 CPEB3Q8NE35 698 aaKnown RBP18.58■□□□□ 0.57
SOX17-201ENST00000297316 SNAPC3Q92966 411 aa18.58■□□□□ 0.57
SOX17-201ENST00000297316 CLCF1Q9UBD9 225 aa18.58■□□□□ 0.57
SOX17-201ENST00000297316 A0A1W2PP11 408 aa18.58■□□□□ 0.56
SOX17-201ENST00000297316 TMEM14DPA8MWL7 114 aa18.58■□□□□ 0.56
SOX17-201ENST00000297316 GTF2F2P13984 249 aa18.58■□□□□ 0.56
SOX17-201ENST00000297316 UBE2V2Q15819 145 aa18.58■□□□□ 0.56
SOX17-201ENST00000297316 PABPC1L2AQ5JQF8 200 aa18.58■□□□□ 0.56
SOX17-201ENST00000297316 GLIPR1L1Q6UWM5 242 aa18.58■□□□□ 0.56
SOX17-201ENST00000297316 TMEM104Q8NE00 496 aa18.58■□□□□ 0.56
SOX17-201ENST00000297316 OR8S1Q8NH09 359 aa18.58■□□□□ 0.56
SOX17-201ENST00000297316 MED28Q9H204 178 aa18.58■□□□□ 0.56
SOX17-201ENST00000297316 NOX3Q9HBY0 568 aa18.58■□□□□ 0.56
SOX17-201ENST00000297316 MRPS28Q9Y2Q9 187 aaKnown RBP18.58■□□□□ 0.56
SOX17-201ENST00000297316 HSPB11Q9Y547 144 aa18.58■□□□□ 0.56
SOX17-201ENST00000297316 AQP7O14520 342 aa18.57■□□□□ 0.56
SOX17-201ENST00000297316 PEX14O75381 377 aa18.57■□□□□ 0.56
SOX17-201ENST00000297316 FARS2O95363 451 aaKnown RBP18.57■□□□□ 0.56
SOX17-201ENST00000297316 CD3DP04234 171 aa18.57■□□□□ 0.56
SOX17-201ENST00000297316 KRTAP27-1Q3LI81 207 aa18.57■□□□□ 0.56
SOX17-201ENST00000297316 Q6ZS92 163 aa18.57■□□□□ 0.56
SOX17-201ENST00000297316 Q6ZSR3 168 aa18.57■□□□□ 0.56
SOX17-201ENST00000297316 NICN1Q9BSH3 213 aa18.57■□□□□ 0.56
SOX17-201ENST00000297316 SSUH2Q9Y2M2 353 aa18.57■□□□□ 0.56
SOX17-201ENST00000297316 CSF1P09603 554 aa18.57■□□□□ 0.56
SOX17-201ENST00000297316 CXCL3P19876 107 aa18.57■□□□□ 0.56
SOX17-201ENST00000297316 PIGLQ9Y2B2 252 aa18.57■□□□□ 0.56
SOX17-201ENST00000297316 ZNF175Q9Y473 711 aa18.57■□□□□ 0.56
SOX17-201ENST00000297316 A0A0A6YYD4 124 aa18.56■□□□□ 0.56
SOX17-201ENST00000297316 LPLP06858 475 aa18.56■□□□□ 0.56
SOX17-201ENST00000297316 ACKR3P25106 362 aa18.56■□□□□ 0.56
SOX17-201ENST00000297316 ZNF260Q3ZCT1 412 aa18.56■□□□□ 0.56
SOX17-201ENST00000297316 DRAM2Q6UX65 266 aa18.56■□□□□ 0.56
SOX17-201ENST00000297316 ZNF101Q8IZC7 436 aa18.56■□□□□ 0.56
SOX17-201ENST00000297316 OR5D18Q8NGL1 313 aa18.56■□□□□ 0.56
SOX17-201ENST00000297316 PLSCR2Q9NRY7 297 aa18.56■□□□□ 0.56
SOX17-201ENST00000297316 IGF2RP11717 2491 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms