RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 CDONQ4KMG0 1287 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 WDR38Q5JTN6 314 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 TEX36Q5VZQ5 186 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 SLC35E4Q6ICL7 350 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 GDPGP1Q6ZNW5 385 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 RNF148Q8N7C7 305 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 FAM216BQ8N7L0 139 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 LY6G5BQ8NDX9 201 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 LRRC29Q8WV35 223 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 C17orf50Q8WW18 174 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 SLC22A4Q9H015 551 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 EGLN3Q9H6Z9 239 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 CENPMQ9NSP4 180 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 MBNL3Q9NUK0 354 aaKnown RBP7.61□□□□□ -1.19
CNOT9-202ENST00000295701 DCAF13Q9NV06 445 aaKnown RBP7.61□□□□□ -1.19
CNOT9-202ENST00000295701 MRPL15Q9P015 296 aaKnown RBP7.61□□□□□ -1.19
CNOT9-202ENST00000295701 ZNRD1Q9P1U0 126 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 KAAG1Q9UBP8 84 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 FAM96BQ9Y3D0 163 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 DNAH9Q9NYC9 4486 aa7.61□□□□□ -1.19
CNOT9-202ENST00000295701 BHLHE40O14503 412 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 ACOT8O14734 319 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 TSPAN9O75954 239 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 GADD45GO95257 159 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 SEMG1P04279 462 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 CLUP10909 449 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 ZNF823P16415 610 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 MSX2P35548 267 aaPredicted RBP7.6□□□□□ -1.19
CNOT9-202ENST00000295701 GSSP48637 474 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 NUDT2P50583 147 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 PSME3P61289 254 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 IKZF1Q13422 519 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 KRT72Q14CN4 511 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 DHRS7BQ6IAN0 325 aaPredicted RBP7.6□□□□□ -1.19
CNOT9-202ENST00000295701 C1orf122Q6ZSJ8 110 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 DPY19L4Q7Z388 723 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 DCXRQ7Z4W1 244 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 C11orf44Q8N8P7 122 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 OR1M1Q8NGA1 313 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 OR9Q1Q8NGQ5 310 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 PPP1R35Q8TAP8 253 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 SPTSSAQ969W0 71 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 COPS4Q9BT78 406 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 DPAGT1Q9H3H5 408 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 EFCAB1Q9HAE3 211 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 SNTG1Q9NSN8 517 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 MRGBPQ9NV56 204 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 ZNF319Q9P2F9 582 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 ABCD2Q9UBJ2 740 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 FOXJ3Q9UPW0 622 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 KPTNQ9Y664 436 aa7.6□□□□□ -1.19
CNOT9-202ENST00000295701 NPFFO15130 113 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 SLC22A2O15244 555 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 TBX1O43435 398 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 IDH3BO43837 385 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 ECDO95905 644 aaPredicted RBP7.59□□□□□ -1.19
CNOT9-202ENST00000295701 GYPBP06028 91 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 FBP1P09467 338 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 SPARCP09486 303 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 CSF1P09603 554 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 FAM3AP98173 230 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 BEAN1Q3B7T3 259 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 KLHL12Q53G59 568 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 PGBD2Q6P3X8 592 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 DRAM2Q6UX65 266 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 WDR82Q6UXN9 313 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 SLC16A9Q7RTY1 509 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 ZDHHC21Q8IVQ6 265 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 SPERTQ8NA61 448 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 SLC37A3Q8NCC5 494 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 PROKR2Q8NFJ6 384 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 OR8D4Q8NGM9 314 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 GNPDA2Q8TDQ7 276 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 RORBQ92753 470 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 TNFRSF14Q92956 283 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 SGK3Q96BR1 496 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 SLAMF6Q96DU3 332 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 PYURFQ96I23 114 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 KCNJ15Q99712 375 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 WDR13Q9H1Z4 485 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 PPA2Q9H2U2 334 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 VIPAS39Q9H9C1 493 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 KRCC1Q9NPI7 259 aaPredicted RBP7.59□□□□□ -1.19
CNOT9-202ENST00000295701 TRIM36Q9NQ86 728 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 PRPF19Q9UMS4 504 aaKnown RBP7.59□□□□□ -1.19
CNOT9-202ENST00000295701 NOP16Q9Y3C1 178 aaKnown RBP7.59□□□□□ -1.19
CNOT9-202ENST00000295701 COMMD3-BMI1R4GMX3 469 aa7.59□□□□□ -1.19
CNOT9-202ENST00000295701 A0A1B0GVI7 797 aa7.58□□□□□ -1.2
CNOT9-202ENST00000295701 ANKRD30BLA7E2S9 258 aa7.58□□□□□ -1.2
CNOT9-202ENST00000295701 ZNF593O00488 134 aaPredicted RBP7.58□□□□□ -1.2
CNOT9-202ENST00000295701 CDIPTO14735 213 aa7.58□□□□□ -1.2
CNOT9-202ENST00000295701 NDUFB3O43676 98 aa7.58□□□□□ -1.2
CNOT9-202ENST00000295701 H2AFXP16104 143 aaPredicted RBP7.58□□□□□ -1.2
CNOT9-202ENST00000295701 RRM2P31350 389 aa7.58□□□□□ -1.2
CNOT9-202ENST00000295701 SAA4P35542 130 aa7.58□□□□□ -1.2
CNOT9-202ENST00000295701 TGM4P49221 684 aa7.58□□□□□ -1.2
CNOT9-202ENST00000295701 PPP1R8Q12972 351 aaKnown RBP7.58□□□□□ -1.2
CNOT9-202ENST00000295701 TSPAN31Q12999 210 aa7.58□□□□□ -1.2
CNOT9-202ENST00000295701 TAF13Q15543 124 aa7.58□□□□□ -1.2
CNOT9-202ENST00000295701 LY6EQ16553 131 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms